Orthogroup:group_1971



Homologs in group_1971

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14780 FBDBKF_14780 Morganella morganii S1 dld D-lactate dehydrogenase
EHELCC_15585 EHELCC_15585 Morganella morganii S2 dld D-lactate dehydrogenase
NLDBIP_16115 NLDBIP_16115 Morganella morganii S4 dld D-lactate dehydrogenase
LHKJJB_15725 LHKJJB_15725 Morganella morganii S3 dld D-lactate dehydrogenase
HKOGLL_14845 HKOGLL_14845 Morganella morganii S5 dld D-lactate dehydrogenase
F4V73_RS07575 F4V73_RS07575 Morganella psychrotolerans dld D-lactate dehydrogenase
PMI_RS04160 PMI_RS04160 Proteus mirabilis HI4320 dld D-lactate dehydrogenase

Distribution of group_1971 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1971 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1971

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1971.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dld 7

Product

# Product Occurence
1 D-lactate dehydrogenase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0277 7 C Energy production and conversion (C) FAD/FMN-containing lactate dehydrogenase/glycolate oxidase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03777 7 D-lactate dehydrogenase (quinone) [EC:1.1.5.12] Pyruvate metabolism
Metabolic pathways
Microbial metabolism in diverse environments
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Pfam domain Annotation(s)

Domain ID Occurences Description
PF01565 6 FAD binding domain
PF09330 7 D-lactate dehydrogenase, membrane binding

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Quinone-dependent D-lactate dehydrogenase 3

Protein length

Min length 581
Max length 589
Mean length (sd) 582.1 (3.0)
Median length 581.0

Protein length distribution