Orthogroup:group_1950


Homologs in group_1950

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14640 FBDBKF_14640 Morganella morganii S1 hisC Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase
EHELCC_15445 EHELCC_15445 Morganella morganii S2 hisC Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase
NLDBIP_15975 NLDBIP_15975 Morganella morganii S4 hisC Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase
LHKJJB_15865 LHKJJB_15865 Morganella morganii S3 hisC Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase
HKOGLL_14985 HKOGLL_14985 Morganella morganii S5 hisC Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase
F4V73_RS07435 F4V73_RS07435 Morganella psychrotolerans - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
PMI_RS07080 PMI_RS07080 Proteus mirabilis HI4320 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme

Distribution of group_1950 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1950 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1950

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1950.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hisC 5
2 - 2

Product

# Product Occurence
1 Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase 5
2 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0079 7 E Amino acid transport and metabolism (E) Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00155 7 Aminotransferase class I and II

Annotations of the 531 SwissProt hits

Annotation Number of occurrences
Adenosylcobalamin biosynthesis bifunctional protein CobDQ 1
Dihydroxyacetone phosphate transaminase Cj1437c 1
Histidinol-phosphate aminotransferase 402
Histidinol-phosphate aminotransferase 1 43
Histidinol-phosphate aminotransferase 1, chloroplastic 1
Histidinol-phosphate aminotransferase 2 42
Histidinol-phosphate aminotransferase 2, chloroplastic 1
Histidinol-phosphate aminotransferase 3 3
Histidinol-phosphate aminotransferase, chloroplastic 2
Probable phenylalanine aminotransferase 1
Putative histidine biosynthesis bifunctional protein HisCD 1
Putative phenylalanine aminotransferase 30
Putative threonine-phosphate decarboxylase 1
Threonine-phosphate decarboxylase 2

Protein length

Min length 385
Max length 389
Mean length (sd) 388.4 (1.5)
Median length 389.0

Protein length distribution