Homologs in group_1950

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14245 FBDBKF_14245 100.0 Morganella morganii S1 dedD cell division protein DedD
EHELCC_08035 EHELCC_08035 100.0 Morganella morganii S2 dedD cell division protein DedD
LHKJJB_05905 LHKJJB_05905 100.0 Morganella morganii S3 dedD cell division protein DedD
HKOGLL_05010 HKOGLL_05010 100.0 Morganella morganii S5 dedD cell division protein DedD
F4V73_RS02665 F4V73_RS02665 85.3 Morganella psychrotolerans dedD cell division protein DedD
PMI_RS08755 PMI_RS08755 61.5 Proteus mirabilis HI4320 dedD cell division protein DedD

Distribution of the homologs in the orthogroup group_1950

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1950

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P09549 1.12e-49 164 50 3 230 1 dedD Cell division protein DedD Escherichia coli (strain K12)
Q99109 5.29e-05 47 65 1 35 1 REP1 Repellent protein 1 Ustilago maydis (strain 521 / FGSC 9021)
P42781 0.000561 44 58 0 34 3 XPR6 Dibasic-processing endoprotease Yarrowia lipolytica (strain CLIB 122 / E 150)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_08360
Feature type CDS
Gene dedD
Product cell division protein DedD
Location 67624 - 68304 (strand: 1)
Length 681 (nucleotides) / 226 (amino acids)
In genomic island -

Contig

Accession ZDB_523
Length 257158 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1950
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF05036 SPOR domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3147 Cell cycle control, cell division, chromosome partitioning (D) D Cell division protein DedD (periplasmic protein involved in septation)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03749 DedD protein - -

Protein Sequence

MASKFQNRLVGTIILVAVGVIVLPVLLDGDKKYNEDQFAAIPLIPKEGEQDEIDAVNPINQTMPTMPSEGASSAMITEAAQTGTEEAPAEASAGGSTTSNVPPGADPLPPVVIPDKQPQPKPEPKPEPKPVPEPEPKPEPKPEPKPEKVPQGQAYVVQLGALSNARKVEEIVATLRLSGYQVYTVPRGKLTLIMVGPSASQAELKSSLGELRQLTGLDGRVQSYKP

Flanking regions ( +/- flanking 50bp)

ATTCCACACAGTGGCTCATGTTATGGATGTTTTAGCGAAGGAAGGTACGGGTGGCCAGTAAATTTCAGAATCGCTTAGTCGGAACCATTATCCTGGTGGCGGTGGGTGTGATTGTCCTGCCGGTGCTGCTGGACGGCGATAAGAAATATAACGAAGACCAGTTCGCAGCCATCCCGCTTATCCCGAAAGAAGGGGAGCAGGATGAGATTGATGCGGTGAATCCGATCAATCAGACTATGCCGACGATGCCGTCAGAAGGGGCATCCAGCGCCATGATTACCGAAGCGGCACAAACCGGGACGGAAGAAGCCCCTGCGGAAGCATCTGCGGGCGGCAGTACCACCTCCAATGTGCCGCCGGGGGCGGATCCGCTGCCGCCGGTGGTGATCCCGGATAAACAACCGCAGCCGAAACCGGAACCTAAGCCTGAACCAAAACCGGTGCCTGAGCCGGAACCAAAACCTGAGCCGAAACCGGAACCTAAGCCGGAAAAAGTGCCGCAGGGACAGGCTTATGTTGTGCAGCTGGGTGCGTTATCCAATGCCCGTAAGGTGGAGGAGATAGTCGCCACACTGCGGTTATCCGGTTATCAGGTGTATACCGTGCCGCGTGGCAAGCTGACGCTGATTATGGTCGGGCCGTCAGCCTCGCAGGCCGAGCTGAAGTCCTCGCTGGGGGAACTGAGACAGCTTACCGGGCTGGATGGCCGGGTGCAGTCTTATAAACCGTAGCGAATTTAAGGAATTAGCAATATCCGTTAATAAAATCAGTTAACTCTTTG