Orthogroup:group_1936


Homologs in group_1936

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14525 FBDBKF_14525 Morganella morganii S1 alpA AlpA family phage regulatory protein
FBDBKF_16620 FBDBKF_16620 Morganella morganii S1 alpA AlpA family transcriptional regulator
EHELCC_07755 EHELCC_07755 Morganella morganii S2 alpA AlpA family phage regulatory protein
NLDBIP_08080 NLDBIP_08080 Morganella morganii S4 alpA AlpA family phage regulatory protein
LHKJJB_06185 LHKJJB_06185 Morganella morganii S3 alpA AlpA family phage regulatory protein
HKOGLL_04730 HKOGLL_04730 Morganella morganii S5 alpA AlpA family phage regulatory protein
PMI_RS17330 PMI_RS17330 Proteus mirabilis HI4320 - AlpA family transcriptional regulator

Distribution of group_1936 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1936 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1936

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1936.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 alpA 6
2 - 1

Product

# Product Occurence
1 AlpA family phage regulatory protein 5
2 AlpA family transcriptional regulator 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3311 7 KX Transcription (K)
Mobilome: prophages, transposons (X)		 DNA-binding transcriptional regulator AlpA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07733 7 prophage regulatory protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF05930 7 Prophage CP4-57 regulatory protein (AlpA)

Annotations of the 1 SwissProt hits

Annotation Number of occurrences
Uncharacterized protein ORF88 1

Protein length

Min length 73
Max length 76
Mean length (sd) 73.4 (1.1)
Median length 73.0

Protein length distribution