COG0377


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0377, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG0377 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1898 FBDBKF_14160 28495 29169 -1 nuoB NADH-quinone oxidoreductase subunit B Morganella morganii S1
1 group_1898 EHELCC_08120 87816 88490 1 nuoB NADH-quinone oxidoreductase subunit B Morganella morganii S2
2 group_1898 NLDBIP_08445 87816 88490 1 nuoB NADH-quinone oxidoreductase subunit B Morganella morganii S4
3 group_1898 LHKJJB_05820 168669 169343 -1 nuoB NADH-quinone oxidoreductase subunit B Morganella morganii S3
4 group_1898 HKOGLL_05095 72407 73081 1 nuoB NADH-quinone oxidoreductase subunit B Morganella morganii S5
5 group_1898 F4V73_RS02775 585197 585871 1 NADH-quinone oxidoreductase subunit B Morganella psychrotolerans
6 group_1898 PMI_RS08640 1887497 1888171 -1 NADH-quinone oxidoreductase subunit B Proteus mirabilis HI4320