Orthogroup:group_1920


Homologs in group_1920

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14285 FBDBKF_14285 Morganella morganii S1 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
EHELCC_07995 EHELCC_07995 Morganella morganii S2 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
NLDBIP_08320 NLDBIP_08320 Morganella morganii S4 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
LHKJJB_05945 LHKJJB_05945 Morganella morganii S3 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
HKOGLL_04970 HKOGLL_04970 Morganella morganii S5 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
F4V73_RS02625 F4V73_RS02625 Morganella psychrotolerans - DMT family transporter
PMI_RS08795 PMI_RS08795 Proteus mirabilis HI4320 - DMT family transporter

Distribution of group_1920 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1920 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1920

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1920.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rhaT 5
2 - 2

Product

# Product Occurence
1 Permease of the drug/metabolite transporter (DMT) superfamily 5
2 DMT family transporter 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0697 7 GER Carbohydrate transport and metabolism (G)
Amino acid transport and metabolism (E)
General function prediction only (R)		 Permease of the drug/metabolite transporter (DMT) superfamily

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00892 7 EamA-like transporter family

Annotations of the 18 SwissProt hits

Annotation Number of occurrences
Biotin transporter 2
Protein PecM 1
Uncharacterized transporter AF_0266 1
Uncharacterized transporter AF_0510 1
Uncharacterized transporter YbhF 1
Uncharacterized transporter YetK 1
Uncharacterized transporter YoaV 1
Uncharacterized transporter YwfM 1
Uncharacterized transporter YyaM 1
WAT1-related protein At1g01070 1
WAT1-related protein At1g11460 1
WAT1-related protein At1g21890 1
WAT1-related protein At3g18200 1
WAT1-related protein At3g30340 1
WAT1-related protein At4g28040 1
WAT1-related protein At4g30420 1
WAT1-related protein At5g40240 1

Protein length

Min length 306
Max length 309
Mean length (sd) 308.3 (1.3)
Median length 309.0

Protein length distribution