Orthogroup:group_190


Homologs in group_190

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08580 FBDBKF_08580 Morganella morganii S1 sfsB putative transcriptional regulator, lambda repressor-like DNA-binding domain
EHELCC_12945 EHELCC_12945 Morganella morganii S2 sfsB putative transcriptional regulator, lambda repressor-like DNA-binding domain
NLDBIP_13285 NLDBIP_13285 Morganella morganii S4 sfsB putative transcriptional regulator, lambda repressor-like DNA-binding domain
LHKJJB_13270 LHKJJB_13270 Morganella morganii S3 sfsB putative transcriptional regulator, lambda repressor-like DNA-binding domain
HKOGLL_11760 HKOGLL_11760 Morganella morganii S5 sfsB putative transcriptional regulator, lambda repressor-like DNA-binding domain
F4V73_RS09805 F4V73_RS09805 Morganella psychrotolerans - helix-turn-helix transcriptional regulator
F4V73_RS16960 F4V73_RS16960 Morganella psychrotolerans - helix-turn-helix transcriptional regulator
PMI_RS04690 PMI_RS04690 Proteus mirabilis HI4320 - helix-turn-helix transcriptional regulator
PMI_RS16930 PMI_RS16930 Proteus mirabilis HI4320 - helix-turn-helix transcriptional regulator

Distribution of group_190 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_190 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_190

Orthogroup content: 9 members

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This page summarizes the annotation of all members of the orthologous group group_190.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sfsB 5
2 - 4

Product

# Product Occurence
1 putative transcriptional regulator, lambda repressor-like DNA-binding domain 5
2 helix-turn-helix transcriptional regulator 4

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3423 9 K Transcription (K) Predicted transcriptional regulator, lambda repressor-like DNA-binding domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07724 9 Ner family transcriptional regulator - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13693 9 Winged helix-turn-helix DNA-binding

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
Mu-like prophage FluMu DNA-binding protein Ner 1
Negative regulator of transcription 2
Sugar fermentation stimulation protein B 4

Protein length

Min length 75
Max length 90
Mean length (sd) 86.8 (4.5)
Median length 88.0

Protein length distribution