Orthogroup:group_19


Homologs in group_19

Help

16 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13065 FBDBKF_13065 Morganella morganii S1 - Phage tail length tape-measure protein 1
FBDBKF_18585 FBDBKF_18585 Morganella morganii S1 - Phage-related minor tail protein
EHELCC_15160 EHELCC_15160 Morganella morganii S2 - Phage-related minor tail protein
EHELCC_19810 EHELCC_19810 Morganella morganii S2 - hypothetical protein
EHELCC_19850 EHELCC_19850 Morganella morganii S2 - hypothetical protein
NLDBIP_15690 NLDBIP_15690 Morganella morganii S4 - Phage-related minor tail protein
NLDBIP_19845 NLDBIP_19845 Morganella morganii S4 - hypothetical protein
NLDBIP_19875 NLDBIP_19875 Morganella morganii S4 - hypothetical protein
LHKJJB_16150 LHKJJB_16150 Morganella morganii S3 - Phage-related minor tail protein
LHKJJB_19815 LHKJJB_19815 Morganella morganii S3 - hypothetical protein
LHKJJB_19840 LHKJJB_19840 Morganella morganii S3 - hypothetical protein
HKOGLL_06005 HKOGLL_06005 Morganella morganii S5 - Phage tail length tape-measure protein 1
HKOGLL_15270 HKOGLL_15270 Morganella morganii S5 - Phage-related minor tail protein
F4V73_RS02200 F4V73_RS02200 Morganella psychrotolerans - phage tail tape measure protein
F4V73_RS17845 F4V73_RS17845 Morganella psychrotolerans - hypothetical protein
PMI_RS02570 PMI_RS02570 Proteus mirabilis HI4320 - phage tail tape measure protein

Distribution of group_19 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_19 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_19

Orthogroup content: 16 members

Help

This page summarizes the annotation of all members of the orthologous group group_19.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 16

Product

# Product Occurence
1 Phage tail length tape-measure protein 1 2
2 Phage-related minor tail protein 5
3 hypothetical protein 7
4 phage tail tape measure protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG5281 15 X Mobilome: prophages, transposons (X) Phage-related minor tail protein

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K26972 4 Enterobacteria phage tape measure protein Virion - Bacteriophage lambda -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF06791 4 Prophage tail length tape measure protein
PF09718 15 Lambda phage tail tape-measure protein (Tape_meas_lam_C)

Annotations of the 5 SwissProt hits

Annotation Number of occurrences
Protein YnaA 1
Tape measure protein 4

Protein length

Min length 95
Max length 988
Mean length (sd) 761.2 (278.3)
Median length 965.5

Protein length distribution