Homologs in group_126

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10 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13065 FBDBKF_13065 24.4 Morganella morganii S1 - Phage tail length tape-measure protein 1
EHELCC_19810 EHELCC_19810 24.1 Morganella morganii S2 - hypothetical protein
EHELCC_19850 EHELCC_19850 24.1 Morganella morganii S2 - hypothetical protein
NLDBIP_19845 NLDBIP_19845 24.1 Morganella morganii S4 - hypothetical protein
NLDBIP_19875 NLDBIP_19875 24.1 Morganella morganii S4 - hypothetical protein
LHKJJB_19815 LHKJJB_19815 24.1 Morganella morganii S3 - hypothetical protein
LHKJJB_19840 LHKJJB_19840 24.1 Morganella morganii S3 - hypothetical protein
HKOGLL_06005 HKOGLL_06005 24.4 Morganella morganii S5 - Phage tail length tape-measure protein 1
F4V73_RS02200 F4V73_RS02200 23.4 Morganella psychrotolerans - phage tail tape measure protein
PMI_RS02570 PMI_RS02570 27.4 Proteus mirabilis HI4320 - phage tail tape measure protein

Distribution of the homologs in the orthogroup group_126

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_126

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS17845
Feature type CDS
Gene -
Product hypothetical protein
Location 14114 - 14401 (strand: 1)
Length 288 (nucleotides) / 95 (amino acids)

Contig

Accession term accessions NZ_VXKB01000008 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 103951 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_126
Orthogroup size 11
N. genomes 7

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Genomic region

Protein Sequence

MRFLPETQTSTLRKEVRALKKAQKNGYSVGEIVTEIARVNSTGNEFADLSKALQQVEYLTGITEYKTVIADGVKGLKPKPKPASSSTLGDDTVLA

Flanking regions ( +/- flanking 50bp)

CACTGCCCCCGTTTAGAATTCTGTGTCAAATAAGTAAAAGGTCAAATGAAATGAGATTTTTACCAGAAACCCAAACTTCAACCCTCCGAAAAGAGGTTCGCGCCTTGAAAAAGGCTCAAAAAAATGGTTACTCTGTCGGTGAAATTGTTACTGAAATTGCAAGAGTAAACAGCACTGGTAATGAGTTTGCTGACTTGAGCAAGGCGTTGCAGCAAGTTGAGTATCTTACAGGTATAACTGAATATAAAACCGTCATAGCTGACGGTGTGAAAGGTTTGAAACCAAAACCAAAACCGGCATCATCGTCAACCCTCGGAGATGATACTGTTTTAGCATAGTTTAGTAATGCGGGTTGGGCGCCCAACCCGCTACACCGTATGTGTTATTT