Orthogroup:group_1897


Homologs in group_1897

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14155 FBDBKF_14155 Morganella morganii S1 nuoC NADH-quinone oxidoreductase subunit C/D
EHELCC_08125 EHELCC_08125 Morganella morganii S2 nuoC NADH-quinone oxidoreductase subunit C/D
NLDBIP_08450 NLDBIP_08450 Morganella morganii S4 nuoC NADH-quinone oxidoreductase subunit C/D
LHKJJB_05815 LHKJJB_05815 Morganella morganii S3 nuoC NADH-quinone oxidoreductase subunit C/D
HKOGLL_05100 HKOGLL_05100 Morganella morganii S5 nuoC NADH-quinone oxidoreductase subunit C/D
F4V73_RS02780 F4V73_RS02780 Morganella psychrotolerans nuoC NADH-quinone oxidoreductase subunit C/D
PMI_RS08635 PMI_RS08635 Proteus mirabilis HI4320 nuoC NADH-quinone oxidoreductase subunit C/D

Distribution of group_1897 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1897 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1897

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1897.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nuoC 7

Product

# Product Occurence
1 NADH-quinone oxidoreductase subunit C/D 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0649 7 C Energy production and conversion (C) NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K13378 7 NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] Oxidative phosphorylation
Metabolic pathways		 NADH:quinone oxidoreductase, prokaryotes

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00329 7 Respiratory-chain NADH dehydrogenase, 30 Kd subunit
PF00346 7 Respiratory-chain NADH dehydrogenase, 49 Kd subunit

Annotations of the 537 SwissProt hits

Annotation Number of occurrences
NAD(P)H-quinone oxidoreductase subunit H 29
NAD(P)H-quinone oxidoreductase subunit H 1 1
NAD(P)H-quinone oxidoreductase subunit H 2 1
NAD(P)H-quinone oxidoreductase subunit H, chloroplastic 76
NAD(P)H-quinone oxidoreductase subunit H, organellar chromatophore 1
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 3
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial 7
NADH-quinone oxidoreductase subunit 4 2
NADH-quinone oxidoreductase subunit B/C/D 6
NADH-quinone oxidoreductase subunit C/D 128
NADH-quinone oxidoreductase subunit C/D 1 1
NADH-quinone oxidoreductase subunit C/D 2 1
NADH-quinone oxidoreductase subunit D 238
NADH-quinone oxidoreductase subunit D 1 20
NADH-quinone oxidoreductase subunit D 2 16
NADH-ubiquinone oxidoreductase 49 kDa subunit 5
NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial 1
Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial 1

Protein length

Min length 598
Max length 599
Mean length (sd) 598.7 (0.5)
Median length 599.0

Protein length distribution