Homologs in group_1859

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13895 FBDBKF_13895 82.5 Morganella morganii S1 terW Tellurium resistance protein TerW
EHELCC_11565 EHELCC_11565 82.5 Morganella morganii S2 terW Tellurium resistance protein TerW
NLDBIP_11910 NLDBIP_11910 82.5 Morganella morganii S4 terW Tellurium resistance protein TerW
LHKJJB_11770 LHKJJB_11770 82.5 Morganella morganii S3 terW Tellurium resistance protein TerW
HKOGLL_10380 HKOGLL_10380 82.5 Morganella morganii S5 terW Tellurium resistance protein TerW
PMI_RS11840 PMI_RS11840 49.0 Proteus mirabilis HI4320 - hypothetical protein

Distribution of the homologs in the orthogroup group_1859

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1859

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75010 5.31e-53 168 56 0 148 3 terW Probable tellurium resistance transcriptional regulator TerW Serratia marcescens
P0DX03 5.31e-53 168 56 0 148 1 terW Probable tellurium resistance transcriptional regulator TerW Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12760
Feature type CDS
Gene -
Product tellurium resistance protein TerW
Location 152199 - 152687 (strand: 1)
Length 489 (nucleotides) / 162 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1859
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Protein Sequence

MQLSTRQVRLFTLATLLGTGKPVSSDAILTTLRCSEATLTRTFKELRDTYNAEIRYRKASHTYQMTDAGELNRKALRKMEEGLENNSGQKPAHYSGKVSLDKEKKKAISLSLTGTMIRKINHLSLLSGKTRSDAVEMLVTLHIDELIESVIRRNEIGDENKK

Flanking regions ( +/- flanking 50bp)

GCATAACGTTATTTTTTTCGATTTTGTTCTTATACAGGTGTCTTCAGACTATGCAATTAAGCACACGACAAGTCCGCTTATTCACACTGGCAACATTGCTCGGTACAGGAAAACCCGTTTCATCGGATGCCATTCTGACGACACTCCGCTGCTCAGAAGCAACACTTACCCGTACATTCAAAGAGTTACGCGATACCTATAATGCAGAGATCCGCTATCGTAAAGCCTCACATACTTATCAGATGACGGATGCCGGGGAACTGAACCGCAAAGCACTGCGAAAAATGGAAGAAGGGCTGGAAAATAACAGCGGGCAGAAACCGGCACATTACAGCGGGAAAGTCTCTCTGGATAAAGAGAAGAAAAAAGCCATTTCGCTGTCACTGACCGGCACAATGATCAGAAAAATTAACCATCTCTCTCTGCTTTCAGGAAAAACCCGCAGTGATGCGGTTGAAATGCTGGTGACACTTCATATCGATGAATTAATTGAATCGGTTATCAGAAGAAATGAGATCGGGGATGAAAACAAAAAATAAGCTACAAAAAAGCCGCCCTGTTTTATACCGGACGGCTTAATTATTCACGC