Orthogroup:group_1880


Homologs in group_1880

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14060 FBDBKF_14060 Morganella morganii S1 katE Catalase
EHELCC_08220 EHELCC_08220 Morganella morganii S2 katE Catalase
NLDBIP_08545 NLDBIP_08545 Morganella morganii S4 katE Catalase
LHKJJB_05720 LHKJJB_05720 Morganella morganii S3 katE Catalase
HKOGLL_05195 HKOGLL_05195 Morganella morganii S5 katE Catalase
F4V73_RS02880 F4V73_RS02880 Morganella psychrotolerans - catalase
PMI_RS08540 PMI_RS08540 Proteus mirabilis HI4320 - catalase

Distribution of group_1880 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1880 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1880

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1880.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 katE 5
2 - 2

Product

# Product Occurence
1 Catalase 5
2 catalase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0753 7 P Inorganic ion transport and metabolism (P) Catalase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00199 7 Catalase
PF06628 7 Catalase-related immune-responsive

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG037029 2 catalase VF0454 Stress survival
VFG037032 5 catalase VF0454 Stress survival

Annotations of the 156 SwissProt hits

Annotation Number of occurrences
Bromoperoxidase-catalase 1
Catalase 74
Catalase A 7
Catalase B 5
Catalase C 1
Catalase HPII 4
Catalase R 1
Catalase T 2
Catalase X 1
Catalase cnsD 1
Catalase easC 7
Catalase ifgD 1
Catalase isozyme 1 8
Catalase isozyme 1 (Fragment) 1
Catalase isozyme 2 8
Catalase isozyme 3 3
Catalase isozyme A 2
Catalase isozyme B 2
Catalase isozyme C 2
Catalase-1 3
Catalase-1 (Fragments) 1
Catalase-1/2 1
Catalase-2 3
Catalase-3 3
Catalase-4 1
Catalase-A 1
Catalase-B 1
Catalase-like protein 1
Catalase-related peroxidase 2
Peroxisomal catalase 5
Peroxisomal catalase 1 1
Peroxisomal catalase A 1
Vegetative catalase 1

Protein length

Min length 480
Max length 484
Mean length (sd) 480.6 (1.5)
Median length 480.0

Protein length distribution