Homologs in group_1842

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13750 FBDBKF_13750 46.1 Morganella morganii S1 - Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
EHELCC_11420 EHELCC_11420 46.1 Morganella morganii S2 - Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
NLDBIP_11765 NLDBIP_11765 46.1 Morganella morganii S4 - Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
LHKJJB_11625 LHKJJB_11625 46.1 Morganella morganii S3 - Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
HKOGLL_10235 HKOGLL_10235 46.1 Morganella morganii S5 - Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
F4V73_RS12620 F4V73_RS12620 44.8 Morganella psychrotolerans - YiiX/YebB-like N1pC/P60 family cysteine hydrolase

Distribution of the homologs in the orthogroup group_1842

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1842

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07460
Feature type CDS
Gene -
Product YiiX/YebB-like N1pC/P60 family cysteine hydrolase
Location 1628234 - 1628734 (strand: -1)
Length 501 (nucleotides) / 166 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1842
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family

Protein Sequence

MLAFPYQLKSGDLVFRDGDEVISDIIKQVDNSGFSHVGMLWITEQGIQVVHSTPSEHADSKDGVTIDSLDFFISRAKPNSVRFYQVRGSEQARQQALEAVLNRVGENFSIQQDKGVFCTELVADAWLKAGVSISTGTRTLHMPFISERALIFPDNIIHSENVILIE

Flanking regions ( +/- flanking 50bp)

TAATACGCTTTACTCTTGCATTAACTTTATACTTAGCGAGCACATTGACTGTGCTCGCTTTCCCTTATCAGTTAAAAAGTGGTGATCTGGTTTTTCGCGATGGTGATGAAGTTATTAGCGACATAATAAAGCAAGTTGATAACAGCGGGTTCAGCCACGTAGGAATGTTGTGGATAACTGAGCAAGGTATACAGGTTGTTCACTCAACACCCAGTGAACATGCTGATAGTAAAGATGGTGTTACTATCGATAGTTTGGATTTCTTTATCAGTCGTGCTAAGCCTAATTCTGTACGCTTTTACCAAGTGCGTGGAAGTGAACAAGCACGACAACAAGCGTTAGAAGCTGTTTTAAATCGAGTAGGGGAAAACTTCAGTATTCAGCAAGATAAAGGTGTTTTTTGTACAGAGCTGGTGGCTGATGCATGGTTAAAAGCAGGGGTTTCTATTTCAACGGGCACACGTACATTACATATGCCGTTTATTTCTGAAAGAGCACTTATTTTTCCTGATAATATTATCCATTCCGAAAATGTTATTTTGATTGAATAAAATAAGGATAAAAGCCTTCTTCCCAAAGAATAAGTATAAATAAACCGCAA