Orthogroup:group_1862


Homologs in group_1862

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13910 FBDBKF_13910 Morganella morganii S1 epd erythrose-4-phosphate dehydrogenase
EHELCC_11580 EHELCC_11580 Morganella morganii S2 epd erythrose-4-phosphate dehydrogenase
NLDBIP_11925 NLDBIP_11925 Morganella morganii S4 epd erythrose-4-phosphate dehydrogenase
LHKJJB_11785 LHKJJB_11785 Morganella morganii S3 epd erythrose-4-phosphate dehydrogenase
HKOGLL_10395 HKOGLL_10395 Morganella morganii S5 epd erythrose-4-phosphate dehydrogenase
F4V73_RS12775 F4V73_RS12775 Morganella psychrotolerans epd erythrose-4-phosphate dehydrogenase
PMI_RS01170 PMI_RS01170 Proteus mirabilis HI4320 epd erythrose-4-phosphate dehydrogenase

Distribution of group_1862 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1862 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1862

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1862.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 epd 7

Product

# Product Occurence
1 erythrose-4-phosphate dehydrogenase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0057 7 G Carbohydrate transport and metabolism (G) Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03472 7 D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] Vitamin B6 metabolism
Metabolic pathways
Biosynthesis of cofactors		 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00044 7 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PF02800 7 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain

Annotations of the 367 SwissProt hits

Annotation Number of occurrences
Aspartate-semialdehyde dehydrogenase 1
D-erythrose-4-phosphate dehydrogenase 92
Glyceraldehyde-3-phosphate dehydrogenase 127
Glyceraldehyde-3-phosphate dehydrogenase (Fragment) 17
Glyceraldehyde-3-phosphate dehydrogenase 1 26
Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragment) 1
Glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic 3
Glyceraldehyde-3-phosphate dehydrogenase 2 27
Glyceraldehyde-3-phosphate dehydrogenase 2 (Fragment) 1
Glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic 2
Glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic (Fragment) 1
Glyceraldehyde-3-phosphate dehydrogenase 3 6
Glyceraldehyde-3-phosphate dehydrogenase 3, cytosolic 2
Glyceraldehyde-3-phosphate dehydrogenase 3.1 1
Glyceraldehyde-3-phosphate dehydrogenase 4 1
Glyceraldehyde-3-phosphate dehydrogenase A 2
Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic 4
Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) 3
Glyceraldehyde-3-phosphate dehydrogenase B 1
Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic 2
Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) 1
Glyceraldehyde-3-phosphate dehydrogenase C 1
Glyceraldehyde-3-phosphate dehydrogenase GAPA1, chloroplastic 1
Glyceraldehyde-3-phosphate dehydrogenase GAPA2, chloroplastic 1
Glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic 1
Glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic 1
Glyceraldehyde-3-phosphate dehydrogenase GAPC2, cytosolic 1
Glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic 1
Glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic 1
Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic 3
Glyceraldehyde-3-phosphate dehydrogenase, chromosomal 1
Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 20
Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) 2
Glyceraldehyde-3-phosphate dehydrogenase, glycosomal 4
Glyceraldehyde-3-phosphate dehydrogenase, muscle 1
Glyceraldehyde-3-phosphate dehydrogenase, plasmid 1
Glyceraldehyde-3-phosphate dehydrogenase, testis-specific 5
Glyceraldehyde-3-phosphate dehydrogenase-like protein 1

Protein length

Min length 339
Max length 340
Mean length (sd) 339.9 (0.4)
Median length 340.0

Protein length distribution