Orthogroup:group_1847


Homologs in group_1847

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13815 FBDBKF_13815 Morganella morganii S1 hpaR homoprotocatechuate degradation operon regulator HpaR
EHELCC_11485 EHELCC_11485 Morganella morganii S2 hpaR homoprotocatechuate degradation operon regulator HpaR
NLDBIP_11830 NLDBIP_11830 Morganella morganii S4 hpaR homoprotocatechuate degradation operon regulator HpaR
LHKJJB_11690 LHKJJB_11690 Morganella morganii S3 hpaR homoprotocatechuate degradation operon regulator HpaR
HKOGLL_10300 HKOGLL_10300 Morganella morganii S5 hpaR homoprotocatechuate degradation operon regulator HpaR
F4V73_RS12680 F4V73_RS12680 Morganella psychrotolerans hpaR homoprotocatechuate degradation operon regulator HpaR
PMI_RS01205 PMI_RS01205 Proteus mirabilis HI4320 hpaR homoprotocatechuate degradation operon regulator HpaR

Distribution of group_1847 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1847 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1847

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1847.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hpaR 7

Product

# Product Occurence
1 homoprotocatechuate degradation operon regulator HpaR 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1846 7 K Transcription (K) DNA-binding transcriptional regulator, MarR family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01047 7 MarR family

Annotations of the 29 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional regulator FarR 1
HTH-type transcriptional regulator MgrA 8
HTH-type transcriptional regulator PecS 1
HTH-type transcriptional regulator SarZ 1
HTH-type transcriptional repressor YetL 1
Homoprotocatechuate degradative operon repressor 2
Multidrug resistance operon repressor 1
Organic hydroperoxide resistance transcriptional regulator 1
Transcriptional activatory protein BadR 1
Transcriptional regulator HosA 4
Transcriptional regulator SlyA 2
Uncharacterized HTH-type transcriptional regulator MW2183 1
Uncharacterized HTH-type transcriptional regulator SA2060 1
Uncharacterized HTH-type transcriptional regulator SACOL2256 1
Uncharacterized HTH-type transcriptional regulator SAR2349 1
Uncharacterized HTH-type transcriptional regulator SAS2155 1
Uncharacterized HTH-type transcriptional regulator SAV2265 1

Protein length

Min length 143
Max length 145
Mean length (sd) 143.6 (1.0)
Median length 143.0

Protein length distribution