Orthogroup:group_1845


Homologs in group_1845

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13795 FBDBKF_13795 Morganella morganii S1 ycaP DUF421 domain-containing protein
EHELCC_11465 EHELCC_11465 Morganella morganii S2 ycaP DUF421 domain-containing protein
NLDBIP_11810 NLDBIP_11810 Morganella morganii S4 ycaP DUF421 domain-containing protein
LHKJJB_11670 LHKJJB_11670 Morganella morganii S3 ycaP DUF421 domain-containing protein
HKOGLL_10280 HKOGLL_10280 Morganella morganii S5 ycaP DUF421 domain-containing protein
F4V73_RS12665 F4V73_RS12665 Morganella psychrotolerans - DUF421 domain-containing protein
PMI_RS01220 PMI_RS01220 Proteus mirabilis HI4320 - DUF421 domain-containing protein

Distribution of group_1845 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1845 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1845

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1845.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ycaP 5
2 - 2

Product

# Product Occurence
1 DUF421 domain-containing protein 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2323 7 S Function unknown (S) Uncharacterized membrane protein YcaP, DUF421 family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04239 7 YetF C-terminal domain
PF20730 7 YetF N-terminal transmembrane domain

Annotations of the 6 SwissProt hits

Annotation Number of occurrences
UPF0702 transmembrane protein YcaP 1
UPF0702 transmembrane protein YdfR 1
UPF0702 transmembrane protein YdfS 1
UPF0702 transmembrane protein YetF 1
UPF0702 transmembrane protein YkjA 1
UPF0702 transmembrane protein YrbG 1

Protein length

Min length 224
Max length 225
Mean length (sd) 224.9 (0.4)
Median length 225.0

Protein length distribution