Orthogroup:group_1843


Homologs in group_1843

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13755 FBDBKF_13755 Morganella morganii S1 rnz ribonuclease Z
EHELCC_11425 EHELCC_11425 Morganella morganii S2 rnz ribonuclease Z
NLDBIP_11770 NLDBIP_11770 Morganella morganii S4 rnz ribonuclease Z
LHKJJB_11630 LHKJJB_11630 Morganella morganii S3 rnz ribonuclease Z
HKOGLL_10240 HKOGLL_10240 Morganella morganii S5 rnz ribonuclease Z
F4V73_RS12625 F4V73_RS12625 Morganella psychrotolerans rnz ribonuclease Z
PMI_RS01225 PMI_RS01225 Proteus mirabilis HI4320 rnz ribonuclease Z

Distribution of group_1843 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1843 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1843

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1843.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rnz 7

Product

# Product Occurence
1 ribonuclease Z 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1234 7 J Translation, ribosomal structure and biogenesis (J) Ribonuclease BN, tRNA processing enzyme

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00784 7 ribonuclease Z [EC:3.1.26.11] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00753 1 Metallo-beta-lactamase superfamily
PF12706 7 Beta-lactamase superfamily domain

Annotations of the 338 SwissProt hits

Annotation Number of occurrences
Arylsulfatase 1
Nuclear ribonuclease Z (Fragment) 1
Putative ribonuclease Z 1
Ribonuclease BN 39
Ribonuclease Z 273
Ribonuclease Z 1 1
Ribonuclease Z 2, mitochondrial 1
Ribonuclease Z, mitochondrial 1
Uncharacterized protein ML1173 1
Uncharacterized protein MT1380 1
Uncharacterized protein Mb1374 1
Uncharacterized protein Rv1339 1
Uncharacterized protein ycf56 2
Zinc phosphodiesterase ELAC protein 1 3
Zinc phosphodiesterase ELAC protein 2 6
Zinc phosphodiesterase ELAC protein 2 homolog 1
tRNAse Z TRZ4, mitochondrial 1
tRNase Z TRZ1 1
tRNase Z TRZ2, chloroplastic 1
tRNase Z TRZ3, mitochondrial 1

Protein length

Unique protein length 305

Protein length distribution