Orthogroup:group_1839


Homologs in group_1839

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13380 FBDBKF_13380 Morganella morganii S1 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase
EHELCC_08715 EHELCC_08715 Morganella morganii S2 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase
NLDBIP_09040 NLDBIP_09040 Morganella morganii S4 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase
LHKJJB_05225 LHKJJB_05225 Morganella morganii S3 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase
HKOGLL_05690 HKOGLL_05690 Morganella morganii S5 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase
F4V73_RS03380 F4V73_RS03380 Morganella psychrotolerans arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase
PMI_RS05070 PMI_RS05070 Proteus mirabilis HI4320 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase

Distribution of group_1839 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1839 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1839

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1839.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 arnB 7

Product

# Product Occurence
1 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0399 7 M Cell wall/membrane/envelope biogenesis (M) dTDP-4-amino-4,6-dideoxygalactose transaminase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01041 7 DegT/DnrJ/EryC1/StrS aminotransferase family

Annotations of the 152 SwissProt hits

Annotation Number of occurrences
3-amino-5-hydroxybenzoate synthase 1
3-oxo-glucose-6-phosphate:glutamate aminotransferase 1
8-amino-3,8-dideoxy-alpha-D-manno-octulosonate transaminase 1
Arginine decarboxylase 4
Asparagine--oxo-acid transaminase 1
Aspartate aminotransferase 11
Aspartate/prephenate aminotransferase 5
Daunorubicin biosynthesis sensory transduction protein DnrJ 1
Erythromycin biosynthesis sensory transduction protein EryC1 1
GDP-4-keto-6-deoxy-D-mannose 3-dehydratase 2
GDP-perosamine synthase 3
L-glutamine:2-deoxy-scyllo-inosose aminotransferase 8
L-glutamine:scyllo-inosose aminotransferase 1
Lipopolysaccharide biosynthesis protein RfbH 1
Pleiotropic regulatory protein 1
Probable N-acetyl-LL-diaminopimelate aminotransferase 1
Probable aspartate aminotransferase 1
Probable aspartate aminotransferase (Fragment) 1
Probable aspartate/prephenate aminotransferase 6
Probable cystathionine gamma-synthase (Fragment) 1
Protein MT3510 1
Protein Mb3436c 1
Protein MosB 1
Protein Rv3402c 1
Putative L-glutamine:3-amino-2,3-dideoxy-scyllo-inosose aminotransferase 3
Putative aminotransferase YugH 1
Putative pyridoxal phosphate-dependent aminotransferase EpsN 1
Serine hydroxymethyltransferase 2
Serine hydroxymethyltransferase 2 2
Spore coat polysaccharide biosynthesis protein SpsC 1
UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase 1
UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 3
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 71
UDP-N-acetyl-3-dehydro-alpha-D-glucosamine 3-aminotranferase 1
UDP-N-acetylbacillosamine transaminase 1
Uncharacterized protein MJ1066 1
dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose transaminase 2
dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase 1
dTDP-4-amino-4,6-dideoxy-D-glucose transaminase 2
dTDP-4-amino-4,6-dideoxygalactose transaminase 1
dTDP-4-dehydro-2,3,6-trideoxy-D-glucose 4-aminotransferase 1
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase 1

Protein length

Unique protein length 381

Protein length distribution