Orthogroup:group_1835


Homologs in group_1835

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13605 FBDBKF_13605 Morganella morganii S1 gcvR Glycine cleavage system regulator GcvR
EHELCC_08490 EHELCC_08490 Morganella morganii S2 gcvR Glycine cleavage system regulator GcvR
NLDBIP_08815 NLDBIP_08815 Morganella morganii S4 gcvR Glycine cleavage system regulator GcvR
LHKJJB_05450 LHKJJB_05450 Morganella morganii S3 gcvR Glycine cleavage system regulator GcvR
HKOGLL_05465 HKOGLL_05465 Morganella morganii S5 gcvR Glycine cleavage system regulator GcvR
F4V73_RS03160 F4V73_RS03160 Morganella psychrotolerans - ACT domain-containing protein
PMI_RS07625 PMI_RS07625 Proteus mirabilis HI4320 - glycine cleavage system transcriptional repressor

Distribution of group_1835 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1835 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1835

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1835.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 gcvR 5
2 - 2

Product

# Product Occurence
1 Glycine cleavage system regulator GcvR 5
2 ACT domain-containing protein 1
3 glycine cleavage system transcriptional repressor 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2716 7 E Amino acid transport and metabolism (E) Glycine cleavage system regulator GcvR

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03567 7 glycine cleavage system transcriptional repressor Biofilm formation - Escherichia coli -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13740 7 ACT domain

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Glycine cleavage system transcriptional repressor 2
UPF0237 protein MMP0657 1

Protein length

Min length 180
Max length 185
Mean length (sd) 180.7 (1.9)
Median length 180.0

Protein length distribution