Orthogroup:group_1834


Homologs in group_1834

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13595 FBDBKF_13595 Morganella morganii S1 bamC outer membrane protein assembly factor BamC
EHELCC_08500 EHELCC_08500 Morganella morganii S2 bamC outer membrane protein assembly factor BamC
NLDBIP_08825 NLDBIP_08825 Morganella morganii S4 bamC outer membrane protein assembly factor BamC
LHKJJB_05440 LHKJJB_05440 Morganella morganii S3 bamC outer membrane protein assembly factor BamC
HKOGLL_05475 HKOGLL_05475 Morganella morganii S5 bamC outer membrane protein assembly factor BamC
F4V73_RS03170 F4V73_RS03170 Morganella psychrotolerans bamC outer membrane protein assembly factor BamC
PMI_RS07615 PMI_RS07615 Proteus mirabilis HI4320 bamC outer membrane protein assembly factor BamC

Distribution of group_1834 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1834 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1834

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1834.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 bamC 7

Product

# Product Occurence
1 outer membrane protein assembly factor BamC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3317 7 M Cell wall/membrane/envelope biogenesis (M) Outer membrane beta-barrel protein assembly factor BamC

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07287 7 outer membrane protein assembly factor BamC - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF06804 7 NlpB/DapX lipoprotein

Annotations of the 18 SwissProt hits

Annotation Number of occurrences
Outer membrane protein assembly factor BamC 18

Protein length

Min length 348
Max length 350
Mean length (sd) 349.0 (0.6)
Median length 349.0

Protein length distribution