Orthogroup:group_1813


Homologs in group_1813

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13445 FBDBKF_13445 Morganella morganii S1 znuA ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA
EHELCC_08650 EHELCC_08650 Morganella morganii S2 znuA ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA
NLDBIP_08975 NLDBIP_08975 Morganella morganii S4 znuA ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA
LHKJJB_05290 LHKJJB_05290 Morganella morganii S3 znuA ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA
HKOGLL_05625 HKOGLL_05625 Morganella morganii S5 znuA ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA
F4V73_RS03320 F4V73_RS03320 Morganella psychrotolerans - metal ABC transporter substrate-binding protein
PMI_RS04990 PMI_RS04990 Proteus mirabilis HI4320 - metal ABC transporter substrate-binding protein

Distribution of group_1813 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1813 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1813

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1813.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 znuA 5
2 - 2

Product

# Product Occurence
1 ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA 5
2 metal ABC transporter substrate-binding protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0803 7 P Inorganic ion transport and metabolism (P) ABC-type Zn uptake system ZnuABC, Zn-binding component ZnuA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11604 7 manganese/iron transport system substrate-binding protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01297 7 Zinc-uptake complex component A periplasmic

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG012575 5 iron/manganese ABC transporter substrate-binding protein SitA VF1116 Nutritional/Metabolic factor
VFG034194 2 iron/manganese ABC transporter substrate-binding protein SitA VF1116 Nutritional/Metabolic factor

Annotations of the 52 SwissProt hits

Annotation Number of occurrences
High-affinity zinc uptake system protein AztC 1
High-affinity zinc uptake system protein ZnuA 10
Iron ABC transporter substrate-binding lipoprotein MtsA 5
Iron-binding protein YfeA 1
Iron-regulated 31 kDa protein (Fragment) 1
Manganese ABC transporter substrate-binding lipoprotein PsaA 6
Manganese ABC transporter substrate-binding lipoprotein scaA 1
Manganese-binding lipoprotein MntA 4
Metal ABC transporter substrate-binding lipoprotein 1
Metal ABC transporter substrate-binding lipoprotein FimA 1
Metal ABC transporter substrate-binding lipoprotein ScbA 1
Metal ABC transporter substrate-binding lipoprotein SloC 1
Metal ABC transporter substrate-binding lipoprotein SsaB 1
Metal-binding protein YtgA 3
Putative metal ABC transporter substrate-binding protein Hpf 1
Putative metal-binding protein CP_0211 1
Putative metal-binding protein CT_415 1
Putative metal-binding protein HI_0362 1
Putative metal-binding protein TC_0696 1
Putative metal-binding protein TM_0123 1
Putative metal-binding protein TP_0034 1
Zinc-binding lipoprotein AdcA 2
Zinc-binding protein AdcA 5
Zinc-binding protein TroA 1

Protein length

Min length 302
Max length 309
Mean length (sd) 308.0 (2.6)
Median length 309.0

Protein length distribution