COG0026


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0026, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Function(s) descr. Nucleotide transport and metabolism (F)

Occurence in the database

COG0026 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1774 FBDBKF_12945 88252 89364 1 hypothetical protein Morganella morganii S1
1 group_1774 EHELCC_06260 258326 259396 1 purK 5-(carboxyamino)imidazole ribonucleotide synthase Morganella morganii S2
2 group_1774 NLDBIP_06580 299391 300461 1 purK 5-(carboxyamino)imidazole ribonucleotide synthase Morganella morganii S4
3 group_1774 LHKJJB_03460 276915 277985 1 purK 5-(carboxyamino)imidazole ribonucleotide synthase Morganella morganii S3
4 group_1774 HKOGLL_06935 198779 199849 1 purK 5-(carboxyamino)imidazole ribonucleotide synthase Morganella morganii S5
5 group_1774 F4V73_RS16110 23932 25002 1 purK 5-(carboxyamino)imidazole ribonucleotide synthase Morganella psychrotolerans
6 group_1774 PMI_RS10655 2342168 2343235 1 purK 5-(carboxyamino)imidazole ribonucleotide synthase Proteus mirabilis HI4320