Orthogroup:group_1797


Homologs in group_1797

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13340 FBDBKF_13340 Morganella morganii S1 nlpC Cell wall-associated hydrolase, NlpC_P60 family
EHELCC_08755 EHELCC_08755 Morganella morganii S2 nlpC Cell wall-associated hydrolase, NlpC_P60 family
NLDBIP_09080 NLDBIP_09080 Morganella morganii S4 nlpC Cell wall-associated hydrolase, NlpC_P60 family
LHKJJB_05185 LHKJJB_05185 Morganella morganii S3 nlpC Cell wall-associated hydrolase, NlpC_P60 family
HKOGLL_05730 HKOGLL_05730 Morganella morganii S5 nlpC Cell wall-associated hydrolase, NlpC_P60 family
F4V73_RS03420 F4V73_RS03420 Morganella psychrotolerans - NlpC/P60 family protein
PMI_RS05105 PMI_RS05105 Proteus mirabilis HI4320 - NlpC/P60 family protein

Distribution of group_1797 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1797 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1797

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1797.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nlpC 5
2 - 2

Product

# Product Occurence
1 Cell wall-associated hydrolase, NlpC_P60 family 5
2 NlpC/P60 family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0791 7 M Cell wall/membrane/envelope biogenesis (M) Cell wall-associated hydrolase, NlpC_P60 family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K13695 7 probable lipoprotein NlpC - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00877 7 NlpC/P60 family

Annotations of the 34 SwissProt hits

Annotation Number of occurrences
Bifunctional muramidase/DL-endopeptidase CwlT 1
D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS 1
Dipeptidyl-peptidase 6 1
Gamma-D-glutamyl-L-lysine dipeptidyl-peptidase 2
Gamma-DL-glutamyl hydrolase 1
Murein DD-endopeptidase MepH 1
Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase 4
Peptidoglycan DL-endopeptidase CwlO 2
Peptidoglycan endopeptidase LytF 1
Peptidoglycan endopeptidase RipB 2
Peptidoglycan hydrolase Cwl0971 1
Probable endopeptidase Cgl2188 1
Probable endopeptidase HI_1314 1
Probable endopeptidase MT2245 1
Probable endopeptidase Mb2213c 1
Probable endopeptidase NlpC 1
Probable endopeptidase NlpC homolog 1
Probable endopeptidase Rv2190c 1
Probable endopeptidase YafL 1
Probable endopeptidase cgR_2070 1
Probable endopeptidase p60 6
Probable peptidoglycan endopeptidase LytE 1
Protein P54 1

Protein length

Min length 161
Max length 163
Mean length (sd) 161.3 (0.8)
Median length 161.0

Protein length distribution