Orthogroup:group_1792


Homologs in group_1792

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13305 FBDBKF_13305 Morganella morganii S1 chuT ABC-type hemin transport system, periplasmic component
EHELCC_08790 EHELCC_08790 Morganella morganii S2 chuT ABC-type hemin transport system, periplasmic component
NLDBIP_09115 NLDBIP_09115 Morganella morganii S4 chuT ABC-type hemin transport system, periplasmic component
LHKJJB_05150 LHKJJB_05150 Morganella morganii S3 chuT ABC-type hemin transport system, periplasmic component
HKOGLL_05765 HKOGLL_05765 Morganella morganii S5 chuT ABC-type hemin transport system, periplasmic component
F4V73_RS03450 F4V73_RS03450 Morganella psychrotolerans - ABC transporter substrate-binding protein
PMI_RS06910 PMI_RS06910 Proteus mirabilis HI4320 - hemin ABC transporter substrate-binding protein

Distribution of group_1792 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1792 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1792

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1792.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 chuT 5
2 - 2

Product

# Product Occurence
1 ABC-type hemin transport system, periplasmic component 5
2 ABC transporter substrate-binding protein 1
3 hemin ABC transporter substrate-binding protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4558 7 P Inorganic ion transport and metabolism (P) ABC-type hemin transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K25132 7 heme transport system substrate-binding protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01497 7 Periplasmic binding protein

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG044293 1 hemin ABC transporter substrate-binding protein VF1253 Nutritional/Metabolic factor

Annotations of the 33 SwissProt hits

Annotation Number of occurrences
Cobalamin-binding protein 2
Hemin-binding periplasmic protein HmuT 1
High-affinity heme uptake system protein IsdE 1
Uncharacterized ABC transporter substrate-binding lipoprotein YvrC 1
Vitamin B12-binding protein 28

Protein length

Min length 271
Max length 276
Mean length (sd) 275.1 (1.9)
Median length 276.0

Protein length distribution