COG0002


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0002, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description N-acetyl-gamma-glutamylphosphate reductase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0002 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1746 FBDBKF_12170 90341 91351 -1 argC N-acetyl-gamma-glutamyl-phosphate reductase Morganella morganii S1
1 group_1746 EHELCC_14135 43354 44364 1 argC N-acetyl-gamma-glutamyl-phosphate reductase Morganella morganii S2
2 group_1746 NLDBIP_15230 47291 48301 1 argC N-acetyl-gamma-glutamyl-phosphate reductase Morganella morganii S4
3 group_1746 LHKJJB_15380 90341 91351 -1 argC N-acetyl-gamma-glutamyl-phosphate reductase Morganella morganii S3
4 group_1746 HKOGLL_14500 77004 78014 -1 argC N-acetyl-gamma-glutamyl-phosphate reductase Morganella morganii S5
5 group_1746 F4V73_RS16980 18041 19051 -1 argC N-acetyl-gamma-glutamyl-phosphate reductase Morganella psychrotolerans
6 group_1746 PMI_RS16005 3556948 3557952 1 argC N-acetyl-gamma-glutamyl-phosphate reductase Proteus mirabilis HI4320