Orthogroup:group_1718


Homologs in group_1718

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_11990 FBDBKF_11990 Morganella morganii S1 dppA dipeptide ABC transporter periplasmic-binding protein DppA
EHELCC_14315 EHELCC_14315 Morganella morganii S2 dppA dipeptide ABC transporter periplasmic-binding protein DppA
NLDBIP_15410 NLDBIP_15410 Morganella morganii S4 dppA dipeptide ABC transporter periplasmic-binding protein DppA
LHKJJB_15200 LHKJJB_15200 Morganella morganii S3 dppA dipeptide ABC transporter periplasmic-binding protein DppA
HKOGLL_14320 HKOGLL_14320 Morganella morganii S5 dppA dipeptide ABC transporter periplasmic-binding protein DppA
F4V73_RS14665 F4V73_RS14665 Morganella psychrotolerans - dipeptide ABC transporter periplasmic-binding protein DppA
PMI_RS14065 PMI_RS14065 Proteus mirabilis HI4320 - ABC transporter substrate-binding protein

Distribution of group_1718 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1718 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1718

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1718.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dppA 5
2 - 2

Product

# Product Occurence
1 dipeptide ABC transporter periplasmic-binding protein DppA 6
2 ABC transporter substrate-binding protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0747 7 E Amino acid transport and metabolism (E) ABC-type transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K12368 7 dipeptide transport system substrate-binding protein ABC transporters
Bacterial chemotaxis		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00496 7 Bacterial extracellular solute-binding proteins, family 5 Middle

Annotations of the 75 SwissProt hits

Annotation Number of occurrences
Di/tripeptide-binding protein 1 1
Di/tripeptide-binding protein 2 1
Di/tripeptide-binding protein 3 1
Di/tripeptide-binding protein 4 1
Dipeptide-binding protein 3
Dipeptide-binding protein DppE 1
Glutathione-binding protein GsiB 16
Heme-binding protein A 1
Metal-staphylopine-binding protein CntA 2
Nickel-binding periplasmic protein 1
Nickel-binding protein NikA 1
Oligopeptide-binding protein AliA 1
Oligopeptide-binding protein AliB 2
Oligopeptide-binding protein AmiA 1
Oligopeptide-binding protein AppA 1
Oligopeptide-binding protein OppA 4
Oligopeptide-binding protein SarA 1
Peptide transport periplasmic protein SapA 2
Peptidoglycan-binding protein YepA 1
Periplasmic alpha-galactoside-binding protein 1
Periplasmic murein peptide-binding protein MppA 1
Periplasmic oligopeptide-binding protein OppA 3
Probable ABC transporter periplasmic-binding protein SapA 1
Probable ABC transporter-binding protein DR_1571 1
Probable D,D-dipeptide-binding periplasmic protein DdpA 1
Probable deoxycholate-binding periplasmic protein YgiS 1
Probable di/tripeptide-binding protein 5 1
Probable peptide ABC transporter periplasmic-binding protein y4tO 1
Probable peptide-binding protein YejA 1
Protein XP55 1
Putative ABC transporter peptide-binding protein BAB2_0812 1
Putative ABC transporter peptide-binding protein BMEII0859 1
Putative ABC transporter peptide-binding protein BOV_A0352 1
Putative ABC transporter peptide-binding protein BRA0409/BS1330_II0406 1
Putative ABC transporter peptide-binding protein BruAb2_0792 1
Putative binding protein BAB2_0664 1
Putative binding protein BMEII0691 1
Putative binding protein BRA0576/BS1330_II0571 1
Putative binding protein BruAb2_0648 1
Putative binding protein HI_0213 1
Putative peptide-binding periplasmic protein BAB2_1049 1
Putative peptide-binding periplasmic protein BMEII0210 1
Putative peptide-binding periplasmic protein BRA1090/BS1330_II1082 1
Putative peptide-binding periplasmic protein BruAb2_1030 1
Tripeptide-binding protein 1
Uncharacterized protein MT1317 1
Uncharacterized protein Mb1311c 1
Uncharacterized protein Rv1280c 1
Uncharacterized protein YhjP 1
Uncharacterized protein y4wM 1

Protein length

Min length 535
Max length 538
Mean length (sd) 537.4 (1.1)
Median length 538.0

Protein length distribution