Orthogroup:group_1713


Homologs in group_1713

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_11945 FBDBKF_11945 Morganella morganii S1 yhjD inner membrane protein YhjD
EHELCC_14360 EHELCC_14360 Morganella morganii S2 yhjD inner membrane protein YhjD
NLDBIP_15455 NLDBIP_15455 Morganella morganii S4 yhjD inner membrane protein YhjD
LHKJJB_15155 LHKJJB_15155 Morganella morganii S3 yhjD inner membrane protein YhjD
HKOGLL_14275 HKOGLL_14275 Morganella morganii S5 yhjD inner membrane protein YhjD
F4V73_RS14710 F4V73_RS14710 Morganella psychrotolerans yhjD inner membrane protein YhjD
PMI_RS14020 PMI_RS14020 Proteus mirabilis HI4320 yhjD inner membrane protein YhjD

Distribution of group_1713 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1713 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1713

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1713.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yhjD 7

Product

# Product Occurence
1 inner membrane protein YhjD 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1295 7 S Function unknown (S) Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07058 7 membrane protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03631 7 Virulence factor BrkB

Annotations of the 2 SwissProt hits

Annotation Number of occurrences
Inner membrane protein YhjD 1
Uncharacterized protein Dda3937_02003 1

Protein length

Min length 330
Max length 340
Mean length (sd) 332.0 (3.8)
Median length 330.0

Protein length distribution