Orthogroup:group_1684


Homologs in group_1684

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_11750 FBDBKF_11750 Morganella morganii S1 - Small ribosomal subunit protein uS12
EHELCC_14555 EHELCC_14555 Morganella morganii S2 - Small ribosomal subunit protein uS12
NLDBIP_15655 NLDBIP_15655 Morganella morganii S4 - Small ribosomal subunit protein uS12
LHKJJB_14960 LHKJJB_14960 Morganella morganii S3 - Small ribosomal subunit protein uS12
HKOGLL_19330 HKOGLL_19330 Morganella morganii S5 - Small ribosomal subunit protein uS12
F4V73_RS14910 F4V73_RS14910 Morganella psychrotolerans rpsL 30S ribosomal protein S12
PMI_RS13805 PMI_RS13805 Proteus mirabilis HI4320 rpsL 30S ribosomal protein S12

Distribution of group_1684 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1684 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1684

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1684.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 5
2 rpsL 2

Product

# Product Occurence
1 Small ribosomal subunit protein uS12 5
2 30S ribosomal protein S12 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0048 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein S12

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02950 7 small subunit ribosomal protein S12 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00164 7 Ribosomal protein S12/S23

Annotations of the 515 SwissProt hits

Annotation Number of occurrences
Small ribosomal subunit protein uS12 488
Small ribosomal subunit protein uS12 (Fragment) 1
Small ribosomal subunit protein uS12c 23
Small ribosomal subunit protein uS12cz/uS12cy 3

Protein length

Unique protein length 124

Protein length distribution