COG0796


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0796, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Glutamate racemase
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)

Occurence in the database

COG0796 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1643 FBDBKF_10860 140527 141393 1 murI glutamate racemase Morganella morganii S1
1 group_1643 EHELCC_19445 11313 12179 1 murI glutamate racemase Morganella morganii S2
2 group_1643 NLDBIP_15025 140517 141383 1 murI glutamate racemase Morganella morganii S4
3 group_1643 LHKJJB_14320 343 1209 -1 murI glutamate racemase Morganella morganii S3
4 group_1643 HKOGLL_12940 343 1209 -1 murI glutamate racemase Morganella morganii S5
5 group_1643 F4V73_RS16890 260 1126 -1 murI glutamate racemase Morganella psychrotolerans
6 group_1643 PMI_RS16055 3568723 3569589 1 murI glutamate racemase Proteus mirabilis HI4320