Orthogroup:group_1675


Homologs in group_1675

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_11650 FBDBKF_11650 Morganella morganii S1 gltX glutamate--tRNA ligase
EHELCC_17570 EHELCC_17570 Morganella morganii S2 gltX glutamate--tRNA ligase
NLDBIP_18780 NLDBIP_18780 Morganella morganii S4 gltX glutamate--tRNA ligase
LHKJJB_18010 LHKJJB_18010 Morganella morganii S3 gltX glutamate--tRNA ligase
HKOGLL_18640 HKOGLL_18640 Morganella morganii S5 gltX glutamate--tRNA ligase
F4V73_RS08030 F4V73_RS08030 Morganella psychrotolerans gltX glutamate--tRNA ligase
PMI_RS08960 PMI_RS08960 Proteus mirabilis HI4320 gltX glutamate--tRNA ligase

Distribution of group_1675 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1675 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1675

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1675.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 gltX 7

Product

# Product Occurence
1 glutamate--tRNA ligase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0008 7 J Translation, ribosomal structure and biogenesis (J) Glutamyl- or glutaminyl-tRNA synthetase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00749 7 tRNA synthetases class I (E and Q), catalytic domain
PF19269 7 Anticodon binding domain

Annotations of the 530 SwissProt hits

Annotation Number of occurrences
Glutamate--tRNA ligase 400
Glutamate--tRNA ligase 1 61
Glutamate--tRNA ligase 2 66
Glutamate--tRNA ligase, chloroplastic/mitochondrial 3

Protein length

Min length 471
Max length 472
Mean length (sd) 471.1 (0.4)
Median length 471.0

Protein length distribution