COG0226


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0226, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type phosphate transport system, periplasmic component
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG0226 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1633 FBDBKF_10750 118438 119478 1 pstS phosphate ABC transporter substrate-binding protein PstS Morganella morganii S1
1 group_1633 EHELCC_15085 118428 119468 1 pstS phosphate ABC transporter substrate-binding protein PstS Morganella morganii S2
2 group_1633 NLDBIP_14915 118428 119468 1 pstS phosphate ABC transporter substrate-binding protein PstS Morganella morganii S4
3 group_1633 LHKJJB_14430 22258 23298 -1 pstS phosphate ABC transporter substrate-binding protein PstS Morganella morganii S3
4 group_1633 HKOGLL_13050 22258 23298 -1 pstS phosphate ABC transporter substrate-binding protein PstS Morganella morganii S5
5 group_1633 F4V73_RS14465 122238 123278 1 pstS phosphate ABC transporter substrate-binding protein PstS Morganella psychrotolerans
6 group_1633 PMI_RS14300 3174264 3175304 1 pstS phosphate ABC transporter substrate-binding protein PstS Proteus mirabilis HI4320