Orthogroup:group_1662


Homologs in group_1662

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_11240 FBDBKF_11240 Morganella morganii S1 - HTH cro/C1-type domain-containing protein
FBDBKF_12900 FBDBKF_12900 Morganella morganii S1 - Uncharacterized HTH-type transcriptional regulator HI_1476
EHELCC_17975 EHELCC_17975 Morganella morganii S2 - HTH cro/C1-type domain-containing protein
NLDBIP_05305 NLDBIP_05305 Morganella morganii S4 - HTH cro/C1-type domain-containing protein
LHKJJB_02185 LHKJJB_02185 Morganella morganii S3 - HTH cro/C1-type domain-containing protein
HKOGLL_15565 HKOGLL_15565 Morganella morganii S5 - HTH cro/C1-type domain-containing protein
PMI_RS02380 PMI_RS02380 Proteus mirabilis HI4320 - S24 family peptidase

Distribution of group_1662 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1662 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1662

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1662.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 7

Product

# Product Occurence
1 HTH cro/C1-type domain-containing protein 5
2 Uncharacterized HTH-type transcriptional regulator HI_1476 1
3 S24 family peptidase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2932 7 X Mobilome: prophages, transposons (X) Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K22300 1 HTH-type transcriptional regulator, cell division transcriptional repressor - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00717 7 Peptidase S24-like
PF01381 1 Helix-turn-helix

Annotations of the 11 SwissProt hits

Annotation Number of occurrences
26 kDa repressor protein 1
HTH-type transcriptional regulator PrtR 1
HTH-type transcriptional regulator RdgA 1
HTH-type transcriptional regulator for conjugative element R391 1
HTH-type transcriptional regulator for conjugative element SXT 1
HTH-type transcriptional regulator for conjugative element pMERPH 1
Regulatory protein cro 1
Repressor protein C2 1
Repressor protein CI 1
Repressor protein CI (Fragment) 1
Uncharacterized HTH-type transcriptional regulator HI_1476 1

Protein length

Min length 121
Max length 230
Mean length (sd) 175.1 (31.5)
Median length 175.0

Protein length distribution