Orthogroup:group_1640


Homologs in group_1640

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10815 FBDBKF_10815 Morganella morganii S1 hisM ABC-type amino acid transport system, permease component
EHELCC_19405 EHELCC_19405 Morganella morganii S2 hisM ABC-type amino acid transport system, permease component
NLDBIP_14980 NLDBIP_14980 Morganella morganii S4 hisM ABC-type amino acid transport system, permease component
LHKJJB_14365 LHKJJB_14365 Morganella morganii S3 hisM ABC-type amino acid transport system, permease component
HKOGLL_12985 HKOGLL_12985 Morganella morganii S5 hisM ABC-type amino acid transport system, permease component
F4V73_RS14500 F4V73_RS14500 Morganella psychrotolerans - amino acid ABC transporter permease
PMI_RS14335 PMI_RS14335 Proteus mirabilis HI4320 - amino acid ABC transporter permease

Distribution of group_1640 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1640 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1640

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1640.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hisM 5
2 - 2

Product

# Product Occurence
1 ABC-type amino acid transport system, permease component 5
2 amino acid ABC transporter permease 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0765 7 E Amino acid transport and metabolism (E) ABC-type amino acid transport system, permease component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02029 7 polar amino acid transport system permease protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00528 7 Binding-protein-dependent transport system inner membrane component

Annotations of the 66 SwissProt hits

Annotation Number of occurrences
Arginine ABC transporter permease protein ArtM 5
Arginine ABC transporter permease protein ArtQ 4
Arginine transport system permease protein ArgU 1
Arginine transport system permease protein ArtQ 1
General L-amino acid transport system permease protein AapM 1
General L-amino acid transport system permease protein AapQ 1
Glutamate transport system permease protein GluC 2
Glutamate transport system permease protein GluD 2
Glutamate/aspartate import permease protein GltJ 2
Glutamate/aspartate import permease protein GltK 3
Glutamate/glutamine/aspartate/asparagine transport system permease protein BztB 1
Glutamate/glutamine/aspartate/asparagine transport system permease protein BztC 1
Glutamine transport system permease protein GlnP 4
Histidine/lysine/arginine/ornithine transport system permease protein HisM 6
Histidine/lysine/arginine/ornithine transport system permease protein HisQ 3
Inner membrane amino-acid ABC transporter permease protein YhdY 1
L-cystine transport system permease protein TcyB 1
L-cystine transport system permease protein TcyL 4
L-cystine transport system permease protein TcyM 1
Nopaline transport system permease protein NocM 1
Nopaline transport system permease protein NocQ 1
Octopine transport system permease protein OccM 2
Octopine transport system permease protein OccQ 3
Phosphate-import permease protein PhnE 1
Probable amino-acid ABC transporter permease protein HI_0179 1
Probable amino-acid ABC transporter permease protein PatM 1
Probable amino-acid ABC transporter permease protein YckA 1
Probable amino-acid ABC transporter permease protein y4tF 1
Probable amino-acid ABC transporter permease protein y4tG 1
Probable amino-acid permease protein YxeN 1
Probable glutamine ABC transporter permease protein GlnM 1
Probable glutamine ABC transporter permease protein GlnP 1
Putative amino-acid ABC transporter permease protein YhdX 1
Putative glutamine transport system permease protein GlnP 5

Protein length

Min length 249
Max length 260
Mean length (sd) 256.3 (3.4)
Median length 257.0

Protein length distribution