Homologs in group_1592

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10380 FBDBKF_10380 64.7 Morganella morganii S1 nudE ADP compounds hydrolase NudE
EHELCC_14715 EHELCC_14715 64.7 Morganella morganii S2 nudE ADP compounds hydrolase NudE
NLDBIP_14545 NLDBIP_14545 64.7 Morganella morganii S4 nudE ADP compounds hydrolase NudE
LHKJJB_14800 LHKJJB_14800 64.7 Morganella morganii S3 nudE ADP compounds hydrolase NudE
HKOGLL_13420 HKOGLL_13420 64.7 Morganella morganii S5 nudE ADP compounds hydrolase NudE
F4V73_RS14075 F4V73_RS14075 68.5 Morganella psychrotolerans nudE ADP compounds hydrolase NudE

Distribution of the homologs in the orthogroup group_1592

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1592

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45799 3.44e-95 277 71 0 179 1 nudE ADP compounds hydrolase NudE Escherichia coli (strain K12)
Q9UKK9 7.79e-09 56 28 4 132 1 NUDT5 ADP-sugar pyrophosphatase Homo sapiens
Q5RCY2 8.95e-09 56 28 4 132 2 NUDT5 ADP-sugar pyrophosphatase Pongo abelii
P54570 1.79e-08 55 25 5 179 1 nudF ADP-ribose pyrophosphatase Bacillus subtilis (strain 168)
O61902 2.02e-08 55 26 4 144 3 ndx-2 Putative nudix hydrolase 2 Caenorhabditis elegans
Q6AY63 5.97e-08 53 26 4 130 2 Nudt5 ADP-sugar pyrophosphatase Rattus norvegicus
Q9JKX6 2.25e-07 52 26 4 124 1 Nudt5 ADP-sugar pyrophosphatase Mus musculus
Q8KP10 8.77e-07 50 23 2 132 1 act Methanol dehydrogenase activator Bacillus methanolicus
B2SFE8 8.8e-07 49 33 2 106 3 rppH RNA pyrophosphohydrolase Francisella tularensis subsp. mediasiatica (strain FSC147)
A4IWB3 1.32e-05 46 33 2 106 3 rppH RNA pyrophosphohydrolase Francisella tularensis subsp. tularensis (strain WY96-3418)
Q5NIB6 1.32e-05 46 33 2 106 3 rppH RNA pyrophosphohydrolase Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
Q0BKE0 1.32e-05 46 33 2 106 3 rppH RNA pyrophosphohydrolase Francisella tularensis subsp. holarctica (strain OSU18)
Q2A1P2 1.32e-05 46 33 2 106 3 rppH RNA pyrophosphohydrolase Francisella tularensis subsp. holarctica (strain LVS)
A7NEA4 1.32e-05 46 33 2 106 3 rppH RNA pyrophosphohydrolase Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA)
Q14JR9 1.32e-05 46 33 2 106 3 rppH RNA pyrophosphohydrolase Francisella tularensis subsp. tularensis (strain FSC 198)
Q9RV46 5.65e-05 45 30 1 86 1 DR_1184 Nudix hydrolase DR_1184 Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
Q9P791 0.000144 44 23 3 139 3 SPBP35G2.12 Uncharacterized Nudix hydrolase P35G2.12 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q17VH2 0.000212 43 34 4 89 3 rppH RNA pyrophosphohydrolase Helicobacter acinonychis (strain Sheeba)
B2UUZ0 0.0003 42 34 4 89 3 rppH RNA pyrophosphohydrolase Helicobacter pylori (strain Shi470)
B6JN68 0.000378 42 33 4 96 3 rppH RNA pyrophosphohydrolase Helicobacter pylori (strain P12)
Q1CS35 0.000409 42 34 4 91 3 rppH RNA pyrophosphohydrolase Helicobacter pylori (strain HPAG1)
O25826 0.000413 42 46 1 47 3 rppH RNA pyrophosphohydrolase Helicobacter pylori (strain ATCC 700392 / 26695)
B5Z8M3 0.000421 42 46 1 47 3 rppH RNA pyrophosphohydrolase Helicobacter pylori (strain G27)
A6Q441 0.000451 42 41 1 58 3 rppH RNA pyrophosphohydrolase Nitratiruptor sp. (strain SB155-2)
C4LD21 0.000596 42 40 1 55 3 rppH RNA pyrophosphohydrolase Tolumonas auensis (strain DSM 9187 / NBRC 110442 / TA 4)
Q01976 0.000859 42 22 2 130 1 YSA1 ADP-ribose pyrophosphatase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS14935
Feature type CDS
Gene nudE
Product ADP compounds hydrolase NudE
Location 3315241 - 3315798 (strand: 1)
Length 558 (nucleotides) / 185 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1592
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00293 NUDIX domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0494 Defense mechanisms (V) V 8-oxo-dGTP pyrophosphatase MutT and related house-cleaning NTP pyrophosphohydrolases, NUDIX family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08312 ADP compounds hydrolase [EC:3.6.1.-] Purine metabolism
Metabolic pathways		 -

Protein Sequence

MKELKKPNILNIDNIARSRLFQIQSVNLEFSNGEKRIYERMKPANREAVMIVPIINDDLILIREYAVGIENYDFGFPKGAIDAGETPLQAANRELKEEIGYGAGSLTEIAKLSMAPSYFSSKMNIVIAQDLYPEQLEGDEPEPLVQIRWPIAKMMDLLDHPDFTEARNVSALFLAQRYLQQVCPK

Flanking regions ( +/- flanking 50bp)

TCATTAATGTGTTAAATTCAGGTTAATCTCTATTCCTATCAGGGGCTGTTATGAAAGAACTAAAAAAACCGAATATACTCAATATTGATAACATTGCCCGTTCTCGGTTATTTCAGATCCAATCCGTTAATCTGGAATTTAGCAACGGCGAAAAACGTATTTATGAACGAATGAAACCCGCTAACCGGGAAGCGGTAATGATAGTCCCTATCATCAATGATGACCTGATCCTTATTCGTGAATATGCTGTTGGCATCGAAAATTATGACTTTGGCTTTCCCAAAGGGGCTATTGATGCGGGTGAAACCCCATTACAAGCGGCCAATCGTGAATTAAAAGAAGAAATTGGCTACGGTGCCGGCTCTTTAACCGAGATAGCTAAACTGTCTATGGCGCCCTCCTATTTTTCCAGCAAAATGAACATTGTTATTGCTCAAGATCTCTATCCTGAACAATTAGAAGGCGATGAGCCTGAGCCGTTAGTTCAAATACGTTGGCCTATCGCCAAGATGATGGACTTATTAGATCATCCCGACTTTACCGAAGCTCGTAATGTCAGTGCACTCTTTTTAGCACAACGTTATTTGCAACAAGTTTGTCCAAAATAATAATTGGCTCGCGATATCCAGATAAAATTAAGGCCACCAAATAGGGAGGC