Orthogroup:group_1607


Homologs in group_1607

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10520 FBDBKF_10520 Morganella morganii S1 fimA Pilin (type 1 fimbrial protein)
EHELCC_14855 EHELCC_14855 Morganella morganii S2 fimA Pilin (type 1 fimbrial protein)
NLDBIP_14685 NLDBIP_14685 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
LHKJJB_14660 LHKJJB_14660 Morganella morganii S3 fimA Pilin (type 1 fimbrial protein)
HKOGLL_13280 HKOGLL_13280 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)
F4V73_RS01850 F4V73_RS01850 Morganella psychrotolerans - fimbrial protein
F4V73_RS14230 F4V73_RS14230 Morganella psychrotolerans - fimbrial protein

Distribution of group_1607 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1607 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1607

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1607.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fimA 5
2 - 2

Product

# Product Occurence
1 Pilin (type 1 fimbrial protein) 5
2 fimbrial protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 7 N Cell motility (N) Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07345 6 major type 1 subunit fimbrin (pilin) Shigellosis
Pertussis		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 7 Fimbrial protein

Annotations of the 21 SwissProt hits

Annotation Number of occurrences
Fimbrial subunit type 1 2
Fimbrial-like protein FimF 1
Fimbrin-like protein FimI 1
KS71A fimbrillin 1
Long polar fimbria protein A 1
Pap fimbrial major pilin protein 1
Probable major fimbrial subunit LpfA 1
Protein LpfE 1
Putative fimbrin-like protein FimI 1
S-fimbrial protein subunit SfaA 1
S-fimbrial protein subunit SfaG 1
Type-1 fimbrial protein subunit 1
Type-1 fimbrial protein, A chain 4
Type-1 fimbrial protein, C chain 2
Uncharacterized fimbrial-like protein SfmF 1
Uncharacterized fimbrial-like protein YraH 1

Protein length

Min length 182
Max length 189
Mean length (sd) 187.7 (2.6)
Median length 189.0

Protein length distribution