Orthogroup:group_1606


Homologs in group_1606

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10495 FBDBKF_10495 Morganella morganii S1 actP Na+(or H+)/acetate symporter ActP
EHELCC_14830 EHELCC_14830 Morganella morganii S2 actP Na+(or H+)/acetate symporter ActP
NLDBIP_14660 NLDBIP_14660 Morganella morganii S4 actP Na+(or H+)/acetate symporter ActP
LHKJJB_14685 LHKJJB_14685 Morganella morganii S3 actP Na+(or H+)/acetate symporter ActP
HKOGLL_13305 HKOGLL_13305 Morganella morganii S5 actP Na+(or H+)/acetate symporter ActP
F4V73_RS14205 F4V73_RS14205 Morganella psychrotolerans - cation acetate symporter
PMI_RS15035 PMI_RS15035 Proteus mirabilis HI4320 - cation acetate symporter

Distribution of group_1606 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1606 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1606

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1606.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 actP 5
2 - 2

Product

# Product Occurence
1 Na+(or H+)/acetate symporter ActP 5
2 cation acetate symporter 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4147 7 C Energy production and conversion (C) Na+(or H+)/acetate symporter ActP

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K14393 7 cation/acetate symporter - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00474 7 Sodium:solute symporter family

Annotations of the 110 SwissProt hits

Annotation Number of occurrences
Cation/acetate symporter ActP 59
High affinity choline transporter 1 1
High-affinity choline transporter 1 1
High-affinity proline transporter PutP 1
Monocarboxylate transport permease protein 1
Monocarboxylic acid transporter 1
Osmoregulated proline transporter OpuE 1
Sodium-coupled monocarboxylate transporter 1 2
Sodium-coupled monocarboxylate transporter 2 2
Sodium/glucose cotransporter 1
Sodium/glucose cotransporter 4 1
Sodium/iodide cotransporter 3
Sodium/mannose cotransporter SLC5A10 1
Sodium/myo-inositol cotransporter 3
Sodium/pantothenate symporter 2
Sodium/proline symporter 21
Sodium/proline symporter 1 1
Sodium/proline symporter 2 1
Sodium/sialic acid symporter NanT 1
Sodium/sialic acid symporter SiaT 1
Solute carrier family 5 member 4 1
Uncharacterized symporter H16_A2524 1
Uncharacterized symporter YhjB 1
Uncharacterized symporter YodF 1
Uncharacterized symporter YwcA 1

Protein length

Min length 549
Max length 551
Mean length (sd) 550.7 (0.8)
Median length 551.0

Protein length distribution