Orthogroup:group_1598



Homologs in group_1598

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10430 FBDBKF_10430 Morganella morganii S1 rpe ribulose-phosphate 3-epimerase
EHELCC_14765 EHELCC_14765 Morganella morganii S2 rpe ribulose-phosphate 3-epimerase
NLDBIP_14595 NLDBIP_14595 Morganella morganii S4 rpe ribulose-phosphate 3-epimerase
LHKJJB_14750 LHKJJB_14750 Morganella morganii S3 rpe ribulose-phosphate 3-epimerase
HKOGLL_13370 HKOGLL_13370 Morganella morganii S5 rpe ribulose-phosphate 3-epimerase
F4V73_RS14125 F4V73_RS14125 Morganella psychrotolerans rpe ribulose-phosphate 3-epimerase
PMI_RS14990 PMI_RS14990 Proteus mirabilis HI4320 rpe ribulose-phosphate 3-epimerase

Distribution of group_1598 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1598 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1598

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1598.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpe 7

Product

# Product Occurence
1 ribulose-phosphate 3-epimerase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0036 7 G Carbohydrate transport and metabolism (G) Pentose-5-phosphate-3-epimerase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00834 7 Ribulose-phosphate 3 epimerase family

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG046612 7 ribulose-phosphate 3-epimerase VF0543 Immune modulation

Annotations of the 51 SwissProt hits

Annotation Number of occurrences
D-allulose-6-phosphate 3-epimerase 1
Protein SgcE 1
Putative epimerase LsrE 5
Ribulose-5-phosphate-3-epimerase, chloroplastic 1
Ribulose-phosphate 3-epimerase 36
Ribulose-phosphate 3-epimerase 1 1
Ribulose-phosphate 3-epimerase 2 1
Ribulose-phosphate 3-epimerase, chloroplastic 2
Ribulose-phosphate 3-epimerase, chloroplastic (Fragment) 1
Ribulose-phosphate 3-epimerase, cytoplasmic isoform 1
Ribulose-phosphate 3-epimerase-like protein 1 1

Protein length

Unique protein length 224

Protein length distribution