COG0495


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0495, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Leucyl-tRNA synthetase
Function(s) descr. Translation, ribosomal structure and biogenesis (J)

Occurence in the database

COG0495 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1549 FBDBKF_10035 99878 102460 1 leuS leucine--tRNA ligase Morganella morganii S1
1 group_1549 EHELCC_04835 291843 294425 1 leuS leucine--tRNA ligase Morganella morganii S2
2 group_1549 NLDBIP_04835 291639 294221 1 leuS leucine--tRNA ligase Morganella morganii S4
3 group_1549 LHKJJB_13795 41157 43739 -1 leuS leucine--tRNA ligase Morganella morganii S3
4 group_1549 HKOGLL_12740 100659 103241 1 leuS leucine--tRNA ligase Morganella morganii S5
5 group_1549 F4V73_RS00300 69229 71811 -1 leuS leucine--tRNA ligase Morganella psychrotolerans
6 group_1549 PMI_RS02135 499556 502138 -1 leuS leucine--tRNA ligase Proteus mirabilis HI4320