Orthogroup:group_1570


Homologs in group_1570

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09830 FBDBKF_09830 Morganella morganii S1 sdhA succinate dehydrogenase flavoprotein subunit
EHELCC_04630 EHELCC_04630 Morganella morganii S2 sdhA succinate dehydrogenase flavoprotein subunit
NLDBIP_04630 NLDBIP_04630 Morganella morganii S4 sdhA succinate dehydrogenase flavoprotein subunit
LHKJJB_14000 LHKJJB_14000 Morganella morganii S3 sdhA succinate dehydrogenase flavoprotein subunit
HKOGLL_12535 HKOGLL_12535 Morganella morganii S5 sdhA succinate dehydrogenase flavoprotein subunit
F4V73_RS00515 F4V73_RS00515 Morganella psychrotolerans sdhA succinate dehydrogenase flavoprotein subunit
PMI_RS02790 PMI_RS02790 Proteus mirabilis HI4320 sdhA succinate dehydrogenase flavoprotein subunit

Distribution of group_1570 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1570 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1570

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1570.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sdhA 7

Product

# Product Occurence
1 succinate dehydrogenase flavoprotein subunit 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0029 7 H Coenzyme transport and metabolism (H) Aspartate oxidase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00890 7 FAD binding domain
PF02910 7 Fumarate reductase flavoprotein C-term

Annotations of the 109 SwissProt hits

Annotation Number of occurrences
8-methylmenaquinol:fumarate reductase flavoprotein subunit 1
Fumarate reductase 1
Fumarate reductase (CoM/CoB) subunit A 1
Fumarate reductase (cytochrome) 3
Fumarate reductase 1 1
Fumarate reductase 2 1
Fumarate reductase flavoprotein subunit 10
L-aspartate oxidase 36
L-aspartate oxidase (Fragment) 1
L-aspartate oxidase 1 1
L-aspartate oxidase 2 1
L-aspartate oxidase 2-a, chloroplastic 1
L-aspartate oxidase 2-b, chloroplastic 1
L-aspartate oxidase, chloroplastic 2
NADH:(hydroxy)cinnamate reductase subunit CrdB 1
NADH:acrylate oxidoreductase 1
NADH:fumarate oxidoreductase 1
Probable fumarate reductase Ifc3 1
Probable succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial 1
Succinate dehydrogenase [rhodoquinone] flavoprotein subunit 1, mitochondrial 1
Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial 1
Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial 3
Succinate dehydrogenase [ubiquinone] flavoprotein subunit A, mitochondrial 1
Succinate dehydrogenase [ubiquinone] flavoprotein subunit B, mitochondrial 1
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial 15
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial (Fragment) 1
Succinate dehydrogenase flavoprotein subunit 13
Uncharacterized FAD-dependent oxidoreductase MJ0033 1
Urocanate reductase 6

Protein length

Min length 569
Max length 588
Mean length (sd) 574.4 (9.3)
Median length 569.0

Protein length distribution