Orthogroup:group_1519


Homologs in group_1519

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09820 FBDBKF_09820 Morganella morganii S1 sucA 2-oxoglutarate dehydrogenase E1 component
EHELCC_04620 EHELCC_04620 Morganella morganii S2 sucA 2-oxoglutarate dehydrogenase E1 component
NLDBIP_04620 NLDBIP_04620 Morganella morganii S4 sucA 2-oxoglutarate dehydrogenase E1 component
LHKJJB_14010 LHKJJB_14010 Morganella morganii S3 sucA 2-oxoglutarate dehydrogenase E1 component
HKOGLL_12525 HKOGLL_12525 Morganella morganii S5 sucA 2-oxoglutarate dehydrogenase E1 component
F4V73_RS00525 F4V73_RS00525 Morganella psychrotolerans sucA 2-oxoglutarate dehydrogenase E1 component
PMI_RS02800 PMI_RS02800 Proteus mirabilis HI4320 sucA 2-oxoglutarate dehydrogenase E1 component

Distribution of group_1519 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1519 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1519

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1519.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sucA 7

Product

# Product Occurence
1 2-oxoglutarate dehydrogenase E1 component 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0567 7 C Energy production and conversion (C) 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00676 7 Dehydrogenase E1 component
PF02779 7 Transketolase, pyrimidine binding domain
PF16078 7 2-oxoglutarate dehydrogenase N-terminus
PF16870 7 2-oxoglutarate dehydrogenase C-terminal

Annotations of the 125 SwissProt hits

Annotation Number of occurrences
2-oxoadipate dehydrogenase complex component E1 6
2-oxoglutarate dehydrogenase E1 component 70
2-oxoglutarate dehydrogenase E1/E2 component 1
2-oxoglutarate dehydrogenase complex component E1 7
2-oxoglutarate dehydrogenase, mitochondrial 5
2-oxoglutarate dehydrogenase, mitochondrial (Fragments) 1
2-oxoglutarate dehydrogenase-like, mitochondrial 4
Multifunctional 2-oxoglutarate metabolism enzyme 13
Oxoglutarate dehydrogenase 1
Probable 2-oxoadipate dehydrogenase complex component E1 homolog 3
Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial 1
Pyruvate dehydrogenase E1 component subunit alpha type I, mitochondrial 1
Pyruvate dehydrogenase E1 component subunit alpha type II, mitochondrial (Fragment) 1
Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial (Fragment) 1
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial 6
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial (Fragment) 1
Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial 3

Protein length

Min length 934
Max length 940
Mean length (sd) 934.9 (2.3)
Median length 934.0

Protein length distribution