Orthogroup:group_1517


Homologs in group_1517

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09810 FBDBKF_09810 Morganella morganii S1 sucC ADP-forming succinate--CoA ligase subunit beta
EHELCC_04610 EHELCC_04610 Morganella morganii S2 sucC ADP-forming succinate--CoA ligase subunit beta
NLDBIP_04610 NLDBIP_04610 Morganella morganii S4 sucC ADP-forming succinate--CoA ligase subunit beta
LHKJJB_14020 LHKJJB_14020 Morganella morganii S3 sucC ADP-forming succinate--CoA ligase subunit beta
HKOGLL_12515 HKOGLL_12515 Morganella morganii S5 sucC ADP-forming succinate--CoA ligase subunit beta
F4V73_RS00535 F4V73_RS00535 Morganella psychrotolerans sucC ADP-forming succinate--CoA ligase subunit beta
PMI_RS02810 PMI_RS02810 Proteus mirabilis HI4320 sucC ADP-forming succinate--CoA ligase subunit beta

Distribution of group_1517 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1517 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1517

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1517.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sucC 7

Product

# Product Occurence
1 ADP-forming succinate--CoA ligase subunit beta 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0045 7 C Energy production and conversion (C) Succinyl-CoA synthetase, beta subunit

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00549 7 CoA-ligase
PF08442 7 ATP-grasp domain

Annotations of the 508 SwissProt hits

Annotation Number of occurrences
Malate--CoA ligase subunit beta 1
Probable malate--CoA ligase subunit beta 1
Succinate--CoA ligase [ADP-forming] subunit beta 480
Succinate--CoA ligase [ADP-forming] subunit beta 1 2
Succinate--CoA ligase [ADP-forming] subunit beta, hydrogenosomal 2
Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 12
Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial (Fragment) 2
Succinate--CoA ligase [GDP-forming] subunit beta 1
Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial 5
Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial (Fragment) 2

Protein length

Unique protein length 388

Protein length distribution