Orthogroup:group_1477


Homologs in group_1477

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09535 FBDBKF_09535 Morganella morganii S1 rhlE ATP-dependent RNA helicase RhlE
EHELCC_04335 EHELCC_04335 Morganella morganii S2 rhlE ATP-dependent RNA helicase RhlE
NLDBIP_04335 NLDBIP_04335 Morganella morganii S4 rhlE ATP-dependent RNA helicase RhlE
LHKJJB_14295 LHKJJB_14295 Morganella morganii S3 rhlE ATP-dependent RNA helicase RhlE
HKOGLL_12240 HKOGLL_12240 Morganella morganii S5 rhlE ATP-dependent RNA helicase RhlE
F4V73_RS00830 F4V73_RS00830 Morganella psychrotolerans rhlE ATP-dependent RNA helicase RhlE
PMI_RS03055 PMI_RS03055 Proteus mirabilis HI4320 rhlE ATP-dependent RNA helicase RhlE

Distribution of group_1477 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1477 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1477

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1477.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rhlE 7

Product

# Product Occurence
1 ATP-dependent RNA helicase RhlE 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0513 7 L Replication, recombination and repair (L) Superfamily II DNA and RNA helicase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11927 7 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] RNA degradation -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00270 7 DEAD/DEAH box helicase
PF00271 7 Helicase conserved C-terminal domain

Annotations of the 525 SwissProt hits

Annotation Number of occurrences
ATP-dependent RNA helicase CshA 2
ATP-dependent RNA helicase DBP1 3
ATP-dependent RNA helicase DBP10 1
ATP-dependent RNA helicase DBP2 19
ATP-dependent RNA helicase DBP2-A 2
ATP-dependent RNA helicase DBP3 18
ATP-dependent RNA helicase DDX3X 2
ATP-dependent RNA helicase DDX3Y 4
ATP-dependent RNA helicase DDX4 1
ATP-dependent RNA helicase DDX42 5
ATP-dependent RNA helicase DDX47 1
ATP-dependent RNA helicase DDX54 2
ATP-dependent RNA helicase DED1 19
ATP-dependent RNA helicase DHH1 16
ATP-dependent RNA helicase DRS1 6
ATP-dependent RNA helicase DbpA 4
ATP-dependent RNA helicase DeaD 11
ATP-dependent RNA helicase FAL1 12
ATP-dependent RNA helicase RhlB 121
ATP-dependent RNA helicase RhlE 1
ATP-dependent RNA helicase SrmB 2
ATP-dependent RNA helicase abstrakt 1
ATP-dependent RNA helicase bel 1
ATP-dependent RNA helicase cgh-1 1
ATP-dependent RNA helicase dbp-3 1
ATP-dependent RNA helicase dbp10 1
ATP-dependent RNA helicase dbp2 10
ATP-dependent RNA helicase dbp3 10
ATP-dependent RNA helicase ddx46 1
ATP-dependent RNA helicase ddx6 1
ATP-dependent RNA helicase ded1 13
ATP-dependent RNA helicase dhh1 6
ATP-dependent RNA helicase drs1 3
ATP-dependent RNA helicase eIF4A 1
ATP-dependent RNA helicase laf-1 1
ATP-dependent RNA helicase me31b 1
ATP-dependent RNA helicase p62 1
ATP-dependent RNA helicase vasa 1
ATP-dependent RNA helicase-like protein DB10 1
ATP-dependent rRNA helicase RRP3 22
ATP-dependent rRNA helicase rrp-3 1
ATP-dependent rRNA helicase rrp3 10
DEAD-box ATP-dependent RNA helicase 10 3
DEAD-box ATP-dependent RNA helicase 11 1
DEAD-box ATP-dependent RNA helicase 12 2
DEAD-box ATP-dependent RNA helicase 14 2
DEAD-box ATP-dependent RNA helicase 20 2
DEAD-box ATP-dependent RNA helicase 21 2
DEAD-box ATP-dependent RNA helicase 24 2
DEAD-box ATP-dependent RNA helicase 28 2
DEAD-box ATP-dependent RNA helicase 3, chloroplastic 2
DEAD-box ATP-dependent RNA helicase 30 2
DEAD-box ATP-dependent RNA helicase 34 1
DEAD-box ATP-dependent RNA helicase 35 1
DEAD-box ATP-dependent RNA helicase 35A 1
DEAD-box ATP-dependent RNA helicase 35B 1
DEAD-box ATP-dependent RNA helicase 36 1
DEAD-box ATP-dependent RNA helicase 37 2
DEAD-box ATP-dependent RNA helicase 3A, chloroplastic 1
DEAD-box ATP-dependent RNA helicase 3B, chloroplastic 1
DEAD-box ATP-dependent RNA helicase 40 2
DEAD-box ATP-dependent RNA helicase 42 2
DEAD-box ATP-dependent RNA helicase 45 1
DEAD-box ATP-dependent RNA helicase 46 1
DEAD-box ATP-dependent RNA helicase 5 2
DEAD-box ATP-dependent RNA helicase 52 1
DEAD-box ATP-dependent RNA helicase 52A 1
DEAD-box ATP-dependent RNA helicase 52B 1
DEAD-box ATP-dependent RNA helicase 52C 1
DEAD-box ATP-dependent RNA helicase 53 1
DEAD-box ATP-dependent RNA helicase 53, mitochondrial 1
DEAD-box ATP-dependent RNA helicase 6 2
DEAD-box ATP-dependent RNA helicase 8 2
DEAD-box ATP-dependent RNA helicase 9 1
DEAD-box ATP-dependent RNA helicase 9, mitochondrial 1
DEAD-box ATP-dependent RNA helicase CshA 24
DEAD-box ATP-dependent RNA helicase CshE 1
DEAD-box ATP-dependent RNA helicase RhpA 2
Eukaryotic initiation factor 4A 2
Eukaryotic initiation factor 4A-10 1
Eukaryotic initiation factor 4A-15 1
Eukaryotic initiation factor 4A-3 1
Eukaryotic initiation factor 4A-7 1
Eukaryotic initiation factor 4A-III 12
Eukaryotic initiation factor 4A-III homolog 1
Eukaryotic initiation factor 4A-III homolog A 1
Eukaryotic initiation factor 4A-III homolog B 1
Eukaryotic initiation factor 4A-III-A 1
Eukaryotic initiation factor 4A-III-B 1
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 13
Pre-mRNA-processing ATP-dependent RNA helicase prp-5 1
Pre-mRNA-processing ATP-dependent RNA helicase prp11 1
Pre-mRNA-processing ATP-dependent RNA helicase prp5 9
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 3
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 3
Probable ATP-dependent RNA helicase DDX17 2
Probable ATP-dependent RNA helicase DDX23 2
Probable ATP-dependent RNA helicase DDX27 3
Probable ATP-dependent RNA helicase DDX4 7
Probable ATP-dependent RNA helicase DDX41 2
Probable ATP-dependent RNA helicase DDX43 1
Probable ATP-dependent RNA helicase DDX46 5
Probable ATP-dependent RNA helicase DDX47 3
Probable ATP-dependent RNA helicase DDX49 2
Probable ATP-dependent RNA helicase DDX5 5
Probable ATP-dependent RNA helicase DDX53 1
Probable ATP-dependent RNA helicase DDX59 2
Probable ATP-dependent RNA helicase DDX6 4
Probable ATP-dependent RNA helicase DDX6 (Fragment) 1
Probable ATP-dependent RNA helicase MJ0669 1
Probable ATP-dependent RNA helicase ddx17 1
Probable ATP-dependent RNA helicase ddx27 1
Probable ATP-dependent RNA helicase ddx3 1
Probable ATP-dependent RNA helicase ddx41 1
Probable ATP-dependent RNA helicase ddx42 1
Probable ATP-dependent RNA helicase ddx47 1
Probable ATP-dependent RNA helicase ddx6 2
Probable ATP-dependent RNA helicase vasa-like 1
Putative ATP-dependent RNA helicase Pl10 1
Putative ATP-dependent RNA helicase T26G10.1 1
Putative ATP-dependent RNA helicase an3 1
Putative DEAD-box ATP-dependent RNA helicase 43 1
Putative DEAD-box RNA helicase HEL64 1
RNA helicase CrhR 1

Protein length

Min length 448
Max length 465
Mean length (sd) 450.9 (6.3)
Median length 448.0

Protein length distribution