Orthogroup:group_1434


Homologs in group_1434

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08870 FBDBKF_08870 Morganella morganii S1 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH
EHELCC_12655 EHELCC_12655 Morganella morganii S2 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH
NLDBIP_12995 NLDBIP_12995 Morganella morganii S4 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH
LHKJJB_13560 LHKJJB_13560 Morganella morganii S3 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH
HKOGLL_11470 HKOGLL_11470 Morganella morganii S5 ampH D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH
F4V73_RS10075 F4V73_RS10075 Morganella psychrotolerans ampH D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH
PMI_RS17280 PMI_RS17280 Proteus mirabilis HI4320 ampH D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH

Distribution of group_1434 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1434 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1434

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1434.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ampH 7

Product

# Product Occurence
1 D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH 5
2 D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1680 7 V Defense mechanisms (V) CubicO group peptidase, beta-lactamase class C family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K18988 7 serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00144 7 Beta-lactamase

Annotations of the 76 SwissProt hits

Annotation Number of occurrences
Beta-lactamase 9
Beta-lactamase CMY-2 1
Beta-lactamase CMY-4 1
Beta-lactamase-like protein 1 1
Beta-lactamase-like protein 2 1
Beta-lactamase-like protein 3 1
Beta-lactamase-like protein 4 1
Beta-lactamase-like protein ARB_00930 1
Beta-lactamase-like protein str5 1
D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH 2
D-aminopeptidase 15
Esterase EstB 1
N-acetylmuramyl-L-alanine amidase 1
Penicillin-binding protein 4* 1
Probable fimbrial assembly protein FimD, serogroup H1 1
Protein Rv1367c 1
Protein flp 8
Putative D-alanyl-D-alanine carboxypeptidase 16
Putative beta-lactamase-like 1 1
Putative fimbrial assembly protein FimD, serogroup D 1
Putative penicillin-binding protein PbpX 1
Teichoic acid D-alanine hydrolase 8
Uncharacterized protein MT1414 1
Unguisins hydrolase ungD' 1

Protein length

Min length 405
Max length 407
Mean length (sd) 406.7 (0.8)
Median length 407.0

Protein length distribution