COG1218


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1218, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG1218 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1378 FBDBKF_08520 84208 84948 1 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ Morganella morganii S1
1 group_1378 EHELCC_13005 78777 79517 -1 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ Morganella morganii S2
2 group_1378 NLDBIP_13345 78777 79517 -1 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ Morganella morganii S4
3 group_1378 LHKJJB_13210 82926 83666 1 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ Morganella morganii S3
4 group_1378 HKOGLL_11820 78777 79517 -1 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ Morganella morganii S5
5 group_1378 F4V73_RS09745 50466 51206 1 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ Morganella psychrotolerans
6 group_1378 PMI_RS16850 3710764 3711504 1 cysQ 3'(2'),5'-bisphosphate nucleotidase CysQ Proteus mirabilis HI4320