Orthogroup:group_1430



Homologs in group_1430

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08835 FBDBKF_08835 Morganella morganii S1 holC DNA polymerase III, chi subunit
EHELCC_12690 EHELCC_12690 Morganella morganii S2 holC DNA polymerase III, chi subunit
NLDBIP_13030 NLDBIP_13030 Morganella morganii S4 holC DNA polymerase III, chi subunit
LHKJJB_13525 LHKJJB_13525 Morganella morganii S3 holC DNA polymerase III, chi subunit
HKOGLL_11505 HKOGLL_11505 Morganella morganii S5 holC DNA polymerase III, chi subunit
F4V73_RS10055 F4V73_RS10055 Morganella psychrotolerans - DNA polymerase III subunit chi
PMI_RS17260 PMI_RS17260 Proteus mirabilis HI4320 - DNA polymerase III subunit chi

Distribution of group_1430 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1430 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1430

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1430.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 holC 5
2 - 2

Product

# Product Occurence
1 DNA polymerase III, chi subunit 5
2 DNA polymerase III subunit chi 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2927 7 L Replication, recombination and repair (L) DNA polymerase III, chi subunit

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02339 7 DNA polymerase III subunit chi [EC:2.7.7.7] DNA replication
Mismatch repair
Homologous recombination
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04364 7 DNA polymerase III chi subunit, HolC

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
DNA polymerase III subunit chi 3

Protein length

Unique protein length 149

Protein length distribution