Orthogroup:group_1412


Homologs in group_1412

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08725 FBDBKF_08725 Morganella morganii S1 emrA Multidrug resistance efflux pump EmrA
EHELCC_12800 EHELCC_12800 Morganella morganii S2 emrA Multidrug resistance efflux pump EmrA
NLDBIP_13140 NLDBIP_13140 Morganella morganii S4 emrA Multidrug resistance efflux pump EmrA
LHKJJB_13415 LHKJJB_13415 Morganella morganii S3 emrA Multidrug resistance efflux pump EmrA
HKOGLL_11615 HKOGLL_11615 Morganella morganii S5 emrA Multidrug resistance efflux pump EmrA
F4V73_RS09945 F4V73_RS09945 Morganella psychrotolerans - efflux RND transporter periplasmic adaptor subunit
PMI_RS17105 PMI_RS17105 Proteus mirabilis HI4320 - efflux RND transporter periplasmic adaptor subunit

Distribution of group_1412 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1412 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1412

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1412.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 emrA 5
2 - 2

Product

# Product Occurence
1 Multidrug resistance efflux pump EmrA 5
2 efflux RND transporter periplasmic adaptor subunit 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1566 7 V Defense mechanisms (V) Multidrug resistance efflux pump EmrA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01993 7 HlyD family secretion protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13533 6 Biotin-lipoyl like
PF16576 7 Barrel-sandwich domain of CusB or HlyD membrane-fusion

Annotations of the 111 SwissProt hits

Annotation Number of occurrences
36 kDa antigen 2
Colistin resistance protein EmrA 1
Fatty acid resistance protein FarA 1
Macrolide export protein MacA 1
Multidrug export protein EmrA 2
Multidrug resistance protein MdtA 39
Multidrug resistance protein MdtN 4
Probable multidrug resistance protein EmrK 1
Putative multidrug resistance protein MdtA 1
Pyoverdine export membrane fusion protein PvdR 2
UPF0194 membrane protein CKO_02332 1
UPF0194 membrane protein Ent638_1286 1
UPF0194 membrane protein RB0873 1
UPF0194 membrane protein YE2891 1
UPF0194 membrane protein YPA_1093 1
UPF0194 membrane protein YPK_2900 1
UPF0194 membrane protein YPN_2816 1
UPF0194 membrane protein YPTB1212 1
UPF0194 membrane protein YPTS_1292 1
UPF0194 membrane protein YP_0975 1
UPF0194 membrane protein YbhG 42
UPF0194 membrane protein YpsIP31758_2812 1
UPF0194 membrane protein in asrC 5'region (Fragment) 1
Uncharacterized protein YdhJ 1
Uncharacterized protein YhiI 1
p-hydroxybenzoic acid efflux pump subunit AaeA 1

Protein length

Unique protein length 323

Protein length distribution