Orthogroup:group_1396


Homologs in group_1396

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08620 FBDBKF_08620 Morganella morganii S1 yhbY ribosome assembly RNA-binding protein YhbY
EHELCC_12905 EHELCC_12905 Morganella morganii S2 yhbY ribosome assembly RNA-binding protein YhbY
NLDBIP_13245 NLDBIP_13245 Morganella morganii S4 yhbY ribosome assembly RNA-binding protein YhbY
LHKJJB_13310 LHKJJB_13310 Morganella morganii S3 yhbY ribosome assembly RNA-binding protein YhbY
HKOGLL_11720 HKOGLL_11720 Morganella morganii S5 yhbY ribosome assembly RNA-binding protein YhbY
F4V73_RS09845 F4V73_RS09845 Morganella psychrotolerans yhbY ribosome assembly RNA-binding protein YhbY
PMI_RS16975 PMI_RS16975 Proteus mirabilis HI4320 yhbY ribosome assembly RNA-binding protein YhbY

Distribution of group_1396 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1396 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1396

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1396.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yhbY 7

Product

# Product Occurence
1 ribosome assembly RNA-binding protein YhbY 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1534 7 J Translation, ribosomal structure and biogenesis (J) RNA-binding protein YhbY

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07574 7 RNA-binding protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01985 7 CRS1 / YhbY (CRM) domain

Annotations of the 8 SwissProt hits

Annotation Number of occurrences
Probable RNA-binding protein MJ0652 1
Probable RNA-binding protein PA4753 1
Probable RNA-binding protein YqeI 1
RNA-binding protein HI_1333 1
RNA-binding protein YhbY 4

Protein length

Unique protein length 97

Protein length distribution