Orthogroup:group_1392


Homologs in group_1392

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08600 FBDBKF_08600 Morganella morganii S1 rpmA 50S ribosomal protein L27
EHELCC_12925 EHELCC_12925 Morganella morganii S2 rpmA 50S ribosomal protein L27
NLDBIP_13265 NLDBIP_13265 Morganella morganii S4 rpmA 50S ribosomal protein L27
LHKJJB_13290 LHKJJB_13290 Morganella morganii S3 rpmA 50S ribosomal protein L27
HKOGLL_11740 HKOGLL_11740 Morganella morganii S5 rpmA 50S ribosomal protein L27
F4V73_RS09825 F4V73_RS09825 Morganella psychrotolerans rpmA 50S ribosomal protein L27
PMI_RS16955 PMI_RS16955 Proteus mirabilis HI4320 rpmA 50S ribosomal protein L27

Distribution of group_1392 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1392 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1392

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1392.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpmA 7

Product

# Product Occurence
1 50S ribosomal protein L27 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0211 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L27

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02899 7 large subunit ribosomal protein L27 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01016 7 Ribosomal L27 protein

Annotations of the 514 SwissProt hits

Annotation Number of occurrences
Large ribosomal subunit protein bL27 505
Large ribosomal subunit protein bL27c 9

Protein length

Min length 85
Max length 86
Mean length (sd) 85.1 (0.4)
Median length 85.0

Protein length distribution