Homologs in group_1336

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08260 FBDBKF_08260 79.6 Morganella morganii S1 wzxE lipid III flippase WzxE
EHELCC_13265 EHELCC_13265 79.6 Morganella morganii S2 wzxE lipid III flippase WzxE
NLDBIP_13605 NLDBIP_13605 79.6 Morganella morganii S4 wzxE lipid III flippase WzxE
LHKJJB_12950 LHKJJB_12950 79.6 Morganella morganii S3 wzxE lipid III flippase WzxE
HKOGLL_12080 HKOGLL_12080 79.6 Morganella morganii S5 wzxE lipid III flippase WzxE
F4V73_RS18810 F4V73_RS18810 78.6 Morganella psychrotolerans wzxE lipid III flippase WzxE

Distribution of the homologs in the orthogroup group_1336

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1336

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AAA8 0.0 613 72 1 417 3 wzxE Lipid III flippase Shigella flexneri
P0AAA7 0.0 613 72 1 417 1 wzxE Lipid III flippase Escherichia coli (strain K12)
P37781 0.000262 46 33 3 113 3 rfbE Putative O-antigen transporter Shigella flexneri

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS16520
Feature type CDS
Gene wzxE
Product lipid III flippase WzxE
Location 3643577 - 3644833 (strand: 1)
Length 1257 (nucleotides) / 418 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1336
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01943 Polysaccharide biosynthesis protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2244 Cell wall/membrane/envelope biogenesis (M) M Membrane protein involved in the export of O-antigen and teichoic acid

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K16693 enterobacterial common antigen flippase - -

Protein Sequence

MSLAKASIWTAGSTLIKIGAGLLVVKLLAVSFGPSGVGLAGNFRQLITVLGVLSGAGIFNGVTKLIAQYQDDAIQRKNVLGTSSSMILLFSTLLAILFLIFTTPISRVLFGDDYLQYLDIVRMVAFIQMGIAYANYFLAILKGYRDASGNALAIIAGSLIGVIAYYLCYLIAGYHGALIGLALVPALILLPAMVILIKRKRFALSELKPSWDKAIASHLGKFTIMALLTSITLPVAYIMMRNLLAEHYSWDDVGIWQGVSSISDAYLQFITASFSVYLLPTLSRLTQKSEIAKEITKSLKFVLPAVAVASFMVWLLRDFAIWLLFSEKFIAMRELFAWQLVGDVLKVGAYVFGYLVIAKAALRFYILTEVSQFALLTLFSRWLIPEHGALGAAQAYMATYIIYFLLCSSVFVIYCRRK

Flanking regions ( +/- flanking 50bp)

AGAAGAGCAGCAAACCGTTATTCATCATATTCGTCATTTCTTTGCTTGATATGTCGTTAGCTAAAGCTTCAATTTGGACAGCTGGGTCAACCTTGATAAAAATCGGGGCTGGCCTGTTGGTCGTAAAGTTATTGGCGGTCTCCTTTGGTCCCTCCGGAGTGGGACTTGCGGGTAACTTCCGCCAATTAATTACCGTTCTTGGTGTACTGTCAGGGGCGGGTATTTTTAATGGTGTAACAAAATTGATTGCGCAATATCAAGATGATGCAATACAACGCAAAAATGTGTTGGGTACATCATCATCAATGATATTGCTGTTTTCTACACTACTTGCCATTTTATTTCTTATTTTTACCACACCAATTAGTCGCGTTTTATTTGGTGATGACTATCTGCAATATCTAGATATTGTCAGAATGGTTGCCTTTATTCAGATGGGTATTGCCTATGCCAACTATTTTCTGGCGATATTAAAAGGTTATCGAGATGCATCTGGAAACGCTTTAGCGATTATTGCGGGAAGTTTAATTGGTGTTATTGCCTATTATCTCTGTTATCTCATTGCCGGTTATCATGGTGCATTAATTGGCTTAGCTTTAGTACCTGCACTGATTTTATTGCCAGCGATGGTTATCTTAATAAAACGTAAGCGTTTTGCTCTCAGTGAATTAAAACCAAGTTGGGATAAGGCTATCGCTAGTCATCTTGGTAAATTTACCATTATGGCGCTACTGACTTCTATCACTTTACCCGTCGCTTATATCATGATGCGTAACTTGTTAGCAGAACATTATAGCTGGGATGATGTTGGCATTTGGCAAGGGGTTAGCAGTATATCGGATGCTTATCTACAATTTATTACAGCATCATTTTCTGTTTACTTATTACCCACACTTTCACGATTAACGCAAAAAAGTGAGATAGCCAAAGAGATAACCAAGTCACTGAAATTCGTCTTGCCAGCGGTGGCAGTGGCTAGTTTTATGGTTTGGTTATTGCGAGATTTTGCCATTTGGTTGCTATTTTCTGAAAAATTTATCGCTATGCGAGAGTTATTTGCTTGGCAACTGGTTGGTGATGTGTTGAAAGTAGGGGCTTATGTTTTTGGCTATCTGGTGATTGCAAAGGCTGCTTTGCGTTTTTATATTCTGACAGAAGTGAGCCAATTTGCCTTATTAACGCTTTTTTCACGCTGGCTTATTCCTGAACATGGTGCTTTAGGTGCAGCTCAAGCCTATATGGCAACCTATATTATTTACTTCCTTCTCTGTAGTTCTGTTTTCGTGATTTATTGCAGGCGCAAATGACAACTTTGATTTACGTACTAGGTTCAGACATTGTGCATCATAACAACACA