Orthogroup:group_1362


Homologs in group_1362

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08440 FBDBKF_08440 Morganella morganii S1 amiC N-acetylmuramoyl-L-alanine amidase
EHELCC_13085 EHELCC_13085 Morganella morganii S2 amiC N-acetylmuramoyl-L-alanine amidase
NLDBIP_13425 NLDBIP_13425 Morganella morganii S4 amiC N-acetylmuramoyl-L-alanine amidase
LHKJJB_13130 LHKJJB_13130 Morganella morganii S3 amiC N-acetylmuramoyl-L-alanine amidase
HKOGLL_11900 HKOGLL_11900 Morganella morganii S5 amiC N-acetylmuramoyl-L-alanine amidase
F4V73_RS09660 F4V73_RS09660 Morganella psychrotolerans - N-acetylmuramoyl-L-alanine amidase
PMI_RS16735 PMI_RS16735 Proteus mirabilis HI4320 - N-acetylmuramoyl-L-alanine amidase

Distribution of group_1362 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1362 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1362

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1362.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 amiC 5
2 - 2

Product

# Product Occurence
1 N-acetylmuramoyl-L-alanine amidase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0860 7 M Cell wall/membrane/envelope biogenesis (M) N-acetylmuramoyl-L-alanine amidase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01448 7 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Cationic antimicrobial peptide (CAMP) resistance -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01520 7 N-acetylmuramoyl-L-alanine amidase
PF11741 6 AMIN domain

Annotations of the 31 SwissProt hits

Annotation Number of occurrences
Endolysin 1
Germination-specific N-acetylmuramoyl-L-alanine amidase 1
N-acetylmuramoyl-L-alanine amidase AmiA 2
N-acetylmuramoyl-L-alanine amidase AmiB 2
N-acetylmuramoyl-L-alanine amidase AmiC 3
N-acetylmuramoyl-L-alanine amidase CwlM 1
N-acetylmuramoyl-L-alanine amidase LytC 1
Probable N-acetylmuramoyl-L-alanine amidase AmiB 1
Probable cell wall amidase LytH 13
Putative N-acetylmuramoyl-L-alanine amidase 3
Putative N-acetylmuramoyl-L-alanine amidase YrvJ 1
Sporulation-specific N-acetylmuramoyl-L-alanine amidase 1
Uncharacterized protein YqiI 1

Protein length

Min length 411
Max length 438
Mean length (sd) 432.0 (9.3)
Median length 435.0

Protein length distribution